Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0417 |
Symbol | |
ID | 5196597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 445111 |
End bp | 446115 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640579955 |
Product | cytochrome d ubiquinol oxidase, subunit II |
Protein accession | YP_001260923 |
Protein GI | 148553341 |
COG category | [C] Energy production and conversion |
COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.227269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGGCT TCGACCTCAC CCTCGCCTGG GCGGCGATCA TCGCCTTCGC GGTGGCCGCC TATGTCGTGA TGGACGGCTT CGACCTGGGG ATCGGCATCC TCTTCCCGGG GTTCCGGGTC GGTGGCGAGC GCGACATGGC GATGAACAGC ATCGCGCCGG TCTGGGACGG CAACGAGACC TGGCTGGTGC TCGGCGGGGG CGGGCTGATG GCGGCCTTTC CGCTCGCCTA TGCGATCATC CTGCCGGCGC TCTACGCGCC GCTGACGGCG ATGCTGCTCG GCCTCGTCTT CCGCGGCGTC GCCTTCGAGT TCCGCTGGCG CGATCCGGGG CACCGCGCCT TCTGGGACGC GGCCTTCTGC GGCGGATCGC TGGTCGCGAC GCTGGCGCAG GGCATCACCC TCGGCGCGCT GCTGCAGGGG ATCGAGGTCG GCGGCCGGGC CTATGCCGGC GGTTGGTGGG ACTGGCTGAC GCCCTTCTCG CTGCTGACCG GGGTCAGCCT GGCGATCGGC TATGCGTTGC TCGGCGCGGG CTGGCTGATC TGGAAGACGG AGGGCGCTCT CCAGGCCGAC GCGCGGCGCT TCGCCCGGCC GCTGTGCCTG GCGCTGCTCG TCGCGATCGC GGCGGTCAGC CTCTACACGC CCTTCCTCGA AGGCAAATAT CATGAGCGCT GGTTCGGCTA TCCCGGCCTG TTCGTGACGA TCCCGGTGCC GCTGCTCGTC GCCGTCGTCG CGCTGCTGTT GTGGCGGTCG ATCGGCGGGC GGCGTGACGG CATGCCCTTC CTGCTGACCC TGGGCCTGTT CGGCCTGTCG ATGCTCGGCC TCGCCATCTC GATCTACCCC GACGTCGTTC CGGGGCGTGT GACGATCTGG GAGGCGGCCG CGCCAGAGCG GAGCCAGGCC TTCATGCTGG TCGGGGCGGT GGTGCTGGTG CCGATCATCC TCGGCTACAC CATCTGGGCC TATTGGGTGT TCCGCGGCAA GGTCGATGAA GCCGGATATC ACTGA
|
Protein sequence | MIGFDLTLAW AAIIAFAVAA YVVMDGFDLG IGILFPGFRV GGERDMAMNS IAPVWDGNET WLVLGGGGLM AAFPLAYAII LPALYAPLTA MLLGLVFRGV AFEFRWRDPG HRAFWDAAFC GGSLVATLAQ GITLGALLQG IEVGGRAYAG GWWDWLTPFS LLTGVSLAIG YALLGAGWLI WKTEGALQAD ARRFARPLCL ALLVAIAAVS LYTPFLEGKY HERWFGYPGL FVTIPVPLLV AVVALLLWRS IGGRRDGMPF LLTLGLFGLS MLGLAISIYP DVVPGRVTIW EAAAPERSQA FMLVGAVVLV PIILGYTIWA YWVFRGKVDE AGYH
|
| |