| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0417 |
|---|
| Symbol | |
|---|
| ID | 5196597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 445111 |
|---|
| End bp | 446115 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640579955 |
|---|
| Product | cytochrome d ubiquinol oxidase, subunit II |
|---|
| Protein accession | YP_001260923 |
|---|
| Protein GI | 148553341 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
|---|
| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.227269 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCT TCGACCTCAC CCTCGCCTGG GCGGCGATCA TCGCCTTCGC GGTGGCCGCC
TATGTCGTGA TGGACGGCTT CGACCTGGGG ATCGGCATCC TCTTCCCGGG GTTCCGGGTC
GGTGGCGAGC GCGACATGGC GATGAACAGC ATCGCGCCGG TCTGGGACGG CAACGAGACC
TGGCTGGTGC TCGGCGGGGG CGGGCTGATG GCGGCCTTTC CGCTCGCCTA TGCGATCATC
CTGCCGGCGC TCTACGCGCC GCTGACGGCG ATGCTGCTCG GCCTCGTCTT CCGCGGCGTC
GCCTTCGAGT TCCGCTGGCG CGATCCGGGG CACCGCGCCT TCTGGGACGC GGCCTTCTGC
GGCGGATCGC TGGTCGCGAC GCTGGCGCAG GGCATCACCC TCGGCGCGCT GCTGCAGGGG
ATCGAGGTCG GCGGCCGGGC CTATGCCGGC GGTTGGTGGG ACTGGCTGAC GCCCTTCTCG
CTGCTGACCG GGGTCAGCCT GGCGATCGGC TATGCGTTGC TCGGCGCGGG CTGGCTGATC
TGGAAGACGG AGGGCGCTCT CCAGGCCGAC GCGCGGCGCT TCGCCCGGCC GCTGTGCCTG
GCGCTGCTCG TCGCGATCGC GGCGGTCAGC CTCTACACGC CCTTCCTCGA AGGCAAATAT
CATGAGCGCT GGTTCGGCTA TCCCGGCCTG TTCGTGACGA TCCCGGTGCC GCTGCTCGTC
GCCGTCGTCG CGCTGCTGTT GTGGCGGTCG ATCGGCGGGC GGCGTGACGG CATGCCCTTC
CTGCTGACCC TGGGCCTGTT CGGCCTGTCG ATGCTCGGCC TCGCCATCTC GATCTACCCC
GACGTCGTTC CGGGGCGTGT GACGATCTGG GAGGCGGCCG CGCCAGAGCG GAGCCAGGCC
TTCATGCTGG TCGGGGCGGT GGTGCTGGTG CCGATCATCC TCGGCTACAC CATCTGGGCC
TATTGGGTGT TCCGCGGCAA GGTCGATGAA GCCGGATATC ACTGA
|
|---|
| Protein sequence | MIGFDLTLAW AAIIAFAVAA YVVMDGFDLG IGILFPGFRV GGERDMAMNS IAPVWDGNET
WLVLGGGGLM AAFPLAYAII LPALYAPLTA MLLGLVFRGV AFEFRWRDPG HRAFWDAAFC
GGSLVATLAQ GITLGALLQG IEVGGRAYAG GWWDWLTPFS LLTGVSLAIG YALLGAGWLI
WKTEGALQAD ARRFARPLCL ALLVAIAAVS LYTPFLEGKY HERWFGYPGL FVTIPVPLLV
AVVALLLWRS IGGRRDGMPF LLTLGLFGLS MLGLAISIYP DVVPGRVTIW EAAAPERSQA
FMLVGAVVLV PIILGYTIWA YWVFRGKVDE AGYH
|
|---|
| |