| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0409 |
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| Symbol | pdxA |
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| ID | 5198602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 434945 |
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| End bp | 435940 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579947 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001260915 |
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| Protein GI | 148553333 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0441476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATAG GGCCCCTTGC CGTCGCGCTG GGCGATCCCG CCGGGATCGG CCCAGAGATC
GTCGCCAAGG CTTGGGACGC CCGCGAGGCG CAGCATCTGG CCCCGTTCTT CGCGGTCGGC
GACCGGCGTT CGATCGAAGC CGTCTGGCAG GGACCGATCC GGCAGATCGC CAGCCCCGAC
GAAGCCGCCG CCCATTTTGC CGACGCGCTG CCGCTGATCC AGATCTCCGA CACCGGGCCG
ATCATCCCGG GCCGGCCCGA CCTGGCCGGC GCCCGCTGCG CGCTCGACTC GCTCGAACTG
GCGGCCGGGC TCGCCCGTTC GGCGATGGTC GGCGGGCTCG TCACCGCGCC GGTGGCGAAG
GCGCAGCTCT ACGCGATCGG CTTCGCCCAT CCCGGCCAGA CCGAATTCGT CGCCGAACGC
TGCGGCGTGG CGTCGGCGAA CACGGTGATG ATGCTGGCGG GACCGACCCT GCGGGCCGTT
CCGATCACCA CCCATATGCC GCTGCGCGAC GTCGCCGACC ATGTGACGGT CGACCTGATC
GTCGCCAAGG CGCGCGCCAC CGATCGCGGC CTGAGCCGCA ATTTCGGGAT CGAGCGCCCG
CGCCTCGCCA TAGCGGGCTT CAATCCGCAT GCCGGGGAAC AGGGCGCGAT CGGCCGGGAG
GAGATCGACC TGATCATCCC CGCCGTCGAG CAGCTTCGCG CCGAAGGGAT CGACATCGTC
GGGCCGCTCG CCGCCGACAC GATGTTCCAC GCCCGCGCCC GCGCCCAATA TGATTGCGCA
CTGTGCCTCT ATCATGATCA GGCGCTGATC CCGCTCAAGA CGCTGCATTT CGACGAGGGC
GTCAACATGA CGCTCGGCCT GCCGATCGTG CGGACCGCGC CCGACCATGG CACCGCCTTC
GGCATCGCCG GCCAGAACAA GGCGCATCCG GGCGCGATGA TCGCGGCGAT CGCGCTGGCC
GCGGAAGCCG CCCGGAACCG CCTCGTCCAC GCATGA
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| Protein sequence | MEIGPLAVAL GDPAGIGPEI VAKAWDAREA QHLAPFFAVG DRRSIEAVWQ GPIRQIASPD
EAAAHFADAL PLIQISDTGP IIPGRPDLAG ARCALDSLEL AAGLARSAMV GGLVTAPVAK
AQLYAIGFAH PGQTEFVAER CGVASANTVM MLAGPTLRAV PITTHMPLRD VADHVTVDLI
VAKARATDRG LSRNFGIERP RLAIAGFNPH AGEQGAIGRE EIDLIIPAVE QLRAEGIDIV
GPLAADTMFH ARARAQYDCA LCLYHDQALI PLKTLHFDEG VNMTLGLPIV RTAPDHGTAF
GIAGQNKAHP GAMIAAIALA AEAARNRLVH A
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