| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0407 |
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| Symbol | |
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| ID | 5196948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 433451 |
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| End bp | 433984 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579945 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001260913 |
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| Protein GI | 148553331 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.644736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.04042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTT CGCCGGTTGC GATTGCCCTG TCCCTGACCC TCGCGGCGGT TTCGAGCGGG
GTGAACGGCC AGAAGGCCGA CGATCAGATC AATCCGAAGT CGCTCGCGCT GCTGACCGAG
GGCCAGGCGG CGCTGAAGGC GGGCAACCTC CAGGGGGCCA ACGACGCGCT GGAGACCGCG
CTCGCGATCG ACCCGCGCAA CCGCGCGGCC TTCGTCGCGC TCGGCCGGGT CGCGCAGGCG
CAGCAGCTTC CGGGCAAGGC GATCCGCATG TATTTCGAGG CGCTCGCGCT CGAACCCAAT
GACGTCGCCG CGCTGTCGGC GCAGGGCGAG GCGATGGTGC AGAAGGGTGC CGTCGAGCGC
GCCCGCGCCA ACCTCGCGCG GGTCAAGGCG CTGTGCAAGA GCGAGTGCGC CCCCGCGACC
GAGCTGGCCG CCGCGATCGC CAAGGGCCCG CCACCGGCCG CCGTCGCCGC CGCGCAGCCC
AACGACAAGG TCCCGCCCAA GGGCGAGGAA AAGAGCGTCG TCAGCGATAA GTGA
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| Protein sequence | MRFSPVAIAL SLTLAAVSSG VNGQKADDQI NPKSLALLTE GQAALKAGNL QGANDALETA
LAIDPRNRAA FVALGRVAQA QQLPGKAIRM YFEALALEPN DVAALSAQGE AMVQKGAVER
ARANLARVKA LCKSECAPAT ELAAAIAKGP PPAAVAAAQP NDKVPPKGEE KSVVSDK
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