| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0388 |
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| Symbol | |
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| ID | 5196693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 414445 |
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| End bp | 415821 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640579928 |
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| Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
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| Protein accession | YP_001260896 |
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| Protein GI | 148553314 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.66105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.559822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA ACTGGACGCC CGCGAGCTGG CGTCAACAAC AAGCGGTGCA GATGCCGGAC
TATCCGGATG CGGCGGCCCT CGCGGCGGCC GAGCAGGAAT TGTCGAGCTT CCCGCCGCTG
GTCTTTGCCG GCGAGGCGCG CGAGCTGACC GCGTCGCTCG CCCAGGTCGC CGCGGGCAAG
GCTTTCCTGC TCCAGGGCGG CGACTGCGCC GAGAGCTTCG CCGAGTTCCA TCCGAACAAC
ATCCGCGACA CCTTCCGCGT GCTGCTGCAG ATGGCGGTGG TGCTGACCTT CGCGTCGAAG
CTGCCGGTGG TGAAGGTCGG CCGCATGGCA GGCCAGTTCG CCAAGCCGCG CTCGGCCCCG
ACCGAGGAGA TCGGCGGCGT CACCCTGCCC AGCTATCGCG GCGACATCAT CAACGACATC
GGCTTCAGCG AGGAATCGCG CATCCCCGAT CCGCGCCGGA TGGTCCGCGC CTACAGCCAG
TCGGCGGCGA CGCTGAACCT GCTGCGCGCC TTCGCGCAGG GCGGCTATGC CAACCTCCAC
CAGGTCCATG CCTGGACGCT CGACTTCATG GGCCGCAGCC CATGGGCCGC GCAATATGGC
GAGGTCGCCG CCCGAATCGG CGACGCGCTC GACTTCATGG CGGCCTGCGG GATCAACCCG
GAGACCGTAC CCCAGCTCAA GGGGACGCAG TTCTACACCA GCCATGAGGC GCTGCTGCTG
CCCTATGAGC AGGCGATGAC GCGCGAGGAC AGCCTCAACA CCGGGCAATA TTTCGACACC
TCGGCGCATT TCCTGTGGAT CGGCGACCGC ACCCGCTTCG AAGGGTCGGC GCATGTCGAA
TATCTGCGCG GCGTCGGCAA CCCGATCGGC CTGAAATGCG GGCCGAGCCT GGAGCCCGAC
GCGCTGCTGC GCCTGCTCGA CACGCTCGAC CCACAGCGCC AGCCCGGCCG CATCACGCTG
ATCACCCGCT ATGGCCATGA CAAGATCGAG AAGCATCTGC CGGCGCTGGT CCGCGCGGTG
AAGCGCGAGG GGCGTCCAGT CGTCTGGTCG TGCGACCCGA TGCACGGCAA CGTCGTCAAG
GCGGCCAACG GCTACAAGAC CCGGCCGTTC GACCGCATCC TCGCCGAGGT CCGCGGCTTC
TTCGCCGTCC ACCGCGCCGA GGGCACCCAT GGCGGCGGCA TCCATGCCGA GATGACCGGC
CAGAACGTCA CCGAATGCAC CGGCGGCGCG ATGGCGGTGA CCGACGAGAA TCTCGCCGAT
CGCTACCACA CCCATTGCGA TCCGCGCCTC AACGCGGGCC AGAGCCTCGA ACTGGCCTTC
CTGCTCGCCG AGATGCTCAA CCAGGAGATG AAGGAGCGCG ACCGGGCCGC CGCCTGA
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| Protein sequence | MATNWTPASW RQQQAVQMPD YPDAAALAAA EQELSSFPPL VFAGEARELT ASLAQVAAGK
AFLLQGGDCA ESFAEFHPNN IRDTFRVLLQ MAVVLTFASK LPVVKVGRMA GQFAKPRSAP
TEEIGGVTLP SYRGDIINDI GFSEESRIPD PRRMVRAYSQ SAATLNLLRA FAQGGYANLH
QVHAWTLDFM GRSPWAAQYG EVAARIGDAL DFMAACGINP ETVPQLKGTQ FYTSHEALLL
PYEQAMTRED SLNTGQYFDT SAHFLWIGDR TRFEGSAHVE YLRGVGNPIG LKCGPSLEPD
ALLRLLDTLD PQRQPGRITL ITRYGHDKIE KHLPALVRAV KREGRPVVWS CDPMHGNVVK
AANGYKTRPF DRILAEVRGF FAVHRAEGTH GGGIHAEMTG QNVTECTGGA MAVTDENLAD
RYHTHCDPRL NAGQSLELAF LLAEMLNQEM KERDRAAA
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