| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0378 |
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| Symbol | |
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| ID | 5200850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 401363 |
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| End bp | 402232 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640579917 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260886 |
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| Protein GI | 148553304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.469183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCT TCTCGATCGA GGGCCGCACC GCCTTCGTCA CCGGCGGAGC GAGCGGGATC
GGGCTGGGCA TCGCCCGCGC GCTGATCGGG CGCGGCGCGC GCGTCGCCGT CGCCGACGTG
GACGGCGCGG CGGTCGGGCG GGCGGTCGAG GCGCTGTCCG CCGCTGGCCG GGTCGAGGGC
GTCGCCCTCG ACGTGCGCGA CCGCAATGGC TGGCAGGCGG CGCGCGCGAC GGTCGAGGCC
GCGCTCGGCC CGGTCAGCCT GCTCGTCAAC AATGCCGGGG TGACCGGCTA TGACCCGATC
GTCGATACGC CGCCCGCCCA TTTCGACTGG ATCGTCGGCG TCAACCTGAC CGGCGCGTTC
AACGGCGTGC ACTGCTTCGG CCGGGCGATG ATCGACCGGG GCGAGGGCGG CCATATCCTC
AACACCGCCT CGATCGCCGG GCTCTACGGC TCCAACGCCC TGACGGTGGG GGCCTATGCC
GCGAGCAAGT TCGGCCTGGT CGGGCTGTCG GAACGGCTGC GCGTCGAGCT GGCGCCGCAC
GGCATCGGCG TGTCGCTGCT CTGTCCGGGA CTGGTCTCGA CCGCGATCGG CGCCAATGCG
GCGAAGCTGC GGCCGGGCCC GGCCGGGATG GCGCTGGCCG ACAATCCGGC TTTCGCCGGG
CTGCGGCAGC GCGCGCCGAC CGCCGGGCTC GATCCCGACC GGCTCGGGCC GTTCGTGGTG
CGGGCGATCG AGGAGAATCG CGCCTACATC ATCCCGCACC CGCATTTCGC CGAGCAGGTC
GAGGCGCGCC ACGCGGCGCT GATGGCCGAT TTCGGCGAGC CGGCCGATCC CGCCCTGCCG
CTCGCGCCCG ACTGGCGCGA CCTGGCCTGA
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| Protein sequence | MSGFSIEGRT AFVTGGASGI GLGIARALIG RGARVAVADV DGAAVGRAVE ALSAAGRVEG
VALDVRDRNG WQAARATVEA ALGPVSLLVN NAGVTGYDPI VDTPPAHFDW IVGVNLTGAF
NGVHCFGRAM IDRGEGGHIL NTASIAGLYG SNALTVGAYA ASKFGLVGLS ERLRVELAPH
GIGVSLLCPG LVSTAIGANA AKLRPGPAGM ALADNPAFAG LRQRAPTAGL DPDRLGPFVV
RAIEENRAYI IPHPHFAEQV EARHAALMAD FGEPADPALP LAPDWRDLA
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