Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0374 |
Symbol | |
ID | 5198913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 397337 |
End bp | 398089 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640579914 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001260883 |
Protein GI | 148553301 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.724626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGAA GCCGGACGAC CGCTCCCATG ATCGACGCGT GCCGCGCGGC GCTGGAGGCG CATCATGCCC GGCACGGCAC GATCCCGTCG ATGGCGGGGC TCGCCAAACT CTGGGGCTAT GCCAGCAAGT CGTCGGCCGC GCGGCGGGTC GGCGAACTGG TCGAGGCCGG AGTACTGGCC TGGTCGGCGG ACCGCAGGCT GCGGCCGGGG CCCGCTTTCC ATTCCGGCCA TCCCCCGTCG CCGATGCCCG ACCCCGGCCT CGATGAAGCG AGGGAGCGCT GGTCGACCGG CTATGACGGC GAGTTGACCC GCGCCTATAT GATGACGGTG CGGCTGCTGC GGCTCGCGCG CAGCATCGAG ATCGGCCTCG CCCGGACGGC GGCCAGCGAG GGGCTGACGG CGGGCGAGGT GCTGGTGCTC GACACGCTGT TCCGCGCTGG GCCGCCGCAT CGGCTCGCGC CCACCGCGCT CAAGAAGCAT TTCGTCATCT CGCTCGCCGG CGTCGCCAAG CGGCTCGAAC GGCTGCTCGC GCTCGGCCTG ATCGAGCGGG TGCCCAATCC CGACGACCGG CGCGGCATGC TCGTCCAGCT CACCGCGAGC GGCATCGCGC TGCTCCAGCG TCTCGTCCAG CTCGATCGCC ACTCGTCCCA CATCATGTGG CCGACAGCGC TGCCCGAGCA GGACTATCGG GTGATGCTCG ATGCCCTACA GGCCGCCCAG GCGTTGATCG AGGCGGAATC GGATGATTTA TAA
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Protein sequence | MARSRTTAPM IDACRAALEA HHARHGTIPS MAGLAKLWGY ASKSSAARRV GELVEAGVLA WSADRRLRPG PAFHSGHPPS PMPDPGLDEA RERWSTGYDG ELTRAYMMTV RLLRLARSIE IGLARTAASE GLTAGEVLVL DTLFRAGPPH RLAPTALKKH FVISLAGVAK RLERLLALGL IERVPNPDDR RGMLVQLTAS GIALLQRLVQ LDRHSSHIMW PTALPEQDYR VMLDALQAAQ ALIEAESDDL
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