| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0369 |
|---|
| Symbol | |
|---|
| ID | 5199608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 390644 |
|---|
| End bp | 392632 |
|---|
| Gene Length | 1989 bp |
|---|
| Protein Length | 662 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640579909 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_001260878 |
|---|
| Protein GI | 148553296 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.550194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGCTTCC CGCATCTGTT CGCGCCGTTC GCGATCCGCG ACCTGCGCCT GAAGAACCGC
ATCGTCATGG CGCCGATGGA GAGCCATCTC GGCAATGCCG ACGGTTCGGT CTCGAAGGAG
GCGATCGCCT ATTATCGCGA GCGTGCGCTG GGCGGCGTCG GCATGGTCGT GGTCGAATAT
ACCTGCGTCG ACGGGCAGGA GGGCTTCAGC TCGATGGCGC CGCAGCTGCG CCTCGATTCC
CCCTTCTACC GCTCGGGCCA CGGCAAGCTG GCGGCGGCGA TCCAGTCGGG CGGGGCGCGG
GCCTGCGTCC AGCTCAGCCA TGCCGGCCGC CAGTCGCGCG AGTCGGTGCT GGGGCGGCAG
CCGGTCGCGC CGTCGGCGGT GCCGCTCACG TCGCTCTACC TGAACGCGGT GCCGCGCGCG
CTGGAGGCGG ATGAGATCGC GCGGATCGTC CGGCGCTATG CCGATGCCGC CGCGCTGGCC
GCGCAGTGCG GTTATGACGC GGTGATGCTC CACGGGGCGC ATGGCTATCT ACTCCAGCAA
TTCCTCTCGC CACTGGTCAA CCGCCGCGAC GACGAATGGG GCGGCGATTT CGAGCGGCGG
CTGCGCTTTC CGCTGGAGGT GGTGAAGGCG GTCCGCGCCG CGATCGGCAA CATGCCGCTG
CTCTACCGCC TGTCGGTGTC GGATTTCATC GAGGGCGGGC TGACGATCGA GGACAGCGAG
CGGATCGCGC CGCACCTGTG CGAGGCCGGG GTCGACGCGA TCGACATCTC CTGCGGCTCG
CTCGACCGGG TCGACGTGAT CGTCGAGCCG ATGTCGATCG AGGAGGGCTG GCGCCTGCCG
ATGGCGCGGC GCATCCGCGC GGCGACCGGC AAGCCGGTGA TCTGCGCGGG GGTGATCCGC
CGGCCGGAGA TGGCCGAGGC GGCGATCGCG GCGGGCGATG CCGACATGAT CTCGCTCGGC
CGCGCGCTGC TCGCCGATCC GCTGTGGCCG AACAAGGCGC GGATGGGGCG CGCCGACGAC
ATCCGCCCCT GCACCTCGTG CAACTGGTGC ATCAAGGAGA CCGGCAGCAA CCGTGGCGTG
AGCTGCGCCG AGAATCCGCG CTGCGGCCAT GAGACCGATC CGCCGATCGA CGCCTTCGGG
CGCGGCCGGC GCGCGGTGGT GGTCGGTGCG GGGCCGGGCG GGATCGCCGC TGCGCTGCTG
CTCGACCAGG CCGGCTTCGC GGTGACGCTG TTCGAGAAGC GCCGCGCCGC CGGCGGCAAC
CTGATCACCT CGGCGACGCC GCCGAACAAG GAGAAGCTGT TCTGGTATCA CGACTTCCTC
CAGCGGCGAC TGGCGGCGAG CGGGGTCGAC CTGTGGCTCG GCACCGAGGC GACGATGGAG
ACGGTCGACG CGGAACGGCC CGACGTCGTG GTGGTCGCGG GCGGATCGCG GCTCGCGCCG
CTCGAACTGG GCGGATCGGG TGGGCTGCCG GTCCACCCCG CCTTCGCGCT GCTGCTCGGC
GACGTCGAGC TTCCGCCGTC CTCGCCCGAG CGGCCGATCC TGATCTACGG CGGCGGCGAG
ACCGGCACCG AGACCGCCGA GCATCTCGCC GGGCAGGGCC ACCATGTCCT GCTCGCCACC
CGCTCCGACG CGGCGATGCT CGCCCGCAAC GCCGAGCCGC TCTACCGCAT CCACCTGCTC
CAGCGCCTGC GCGCCAACGC CGCGATCACC GTCGCCGACC ATAGCCTGCT GACCGTGATC
GAGGGCGATC ACGTCCTGCT CGAAAGCGGT GGCGAGACGC GGCGCCAGCC GGCGGCGGCG
GTGCTGCTGG CGCATGGGCT GGTGCCCGAC ACGGCGCTTG CCGAGGCGCT GCGCGACCTG
CCCGTGCCGG TGGTGCCGAT CGGCGACGCG GTGCGGGTCG GCCGCATCGG CGAGGCGGTG
CGCGACGCCT ATCGCTGCGT CCAGGATCTA CGAAGGACCC TATATCAACC GGAGGCCATA
GCATGCTGA
|
|---|
| Protein sequence | MGFPHLFAPF AIRDLRLKNR IVMAPMESHL GNADGSVSKE AIAYYRERAL GGVGMVVVEY
TCVDGQEGFS SMAPQLRLDS PFYRSGHGKL AAAIQSGGAR ACVQLSHAGR QSRESVLGRQ
PVAPSAVPLT SLYLNAVPRA LEADEIARIV RRYADAAALA AQCGYDAVML HGAHGYLLQQ
FLSPLVNRRD DEWGGDFERR LRFPLEVVKA VRAAIGNMPL LYRLSVSDFI EGGLTIEDSE
RIAPHLCEAG VDAIDISCGS LDRVDVIVEP MSIEEGWRLP MARRIRAATG KPVICAGVIR
RPEMAEAAIA AGDADMISLG RALLADPLWP NKARMGRADD IRPCTSCNWC IKETGSNRGV
SCAENPRCGH ETDPPIDAFG RGRRAVVVGA GPGGIAAALL LDQAGFAVTL FEKRRAAGGN
LITSATPPNK EKLFWYHDFL QRRLAASGVD LWLGTEATME TVDAERPDVV VVAGGSRLAP
LELGGSGGLP VHPAFALLLG DVELPPSSPE RPILIYGGGE TGTETAEHLA GQGHHVLLAT
RSDAAMLARN AEPLYRIHLL QRLRANAAIT VADHSLLTVI EGDHVLLESG GETRRQPAAA
VLLAHGLVPD TALAEALRDL PVPVVPIGDA VRVGRIGEAV RDAYRCVQDL RRTLYQPEAI
AC
|
|---|
| |