Gene Swit_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0338 
Symbol 
ID5199333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp360431 
End bp361618 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID640579878 
Producthypothetical protein 
Protein accessionYP_001260847 
Protein GI148553265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.106434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCA CCGATGCCGC CTGGGCCGAC TATCAGCGCG TGATCGACGA GGCGCGCACC 
CGCGCGATGA CGTCGAGCTG GGCGAGCACG CCGCAGCTTC GCGCGCAGGC GGCCTATTAT
ATCTCGATGC TGCAGGCGTT CGGCTTCAAC CTCTACATGG CGCCGCGGCA GGCCTATCCG
ACCTTCTTCT CGCATACGAT CTTCACGCCC GTGGAATATC AGTGGGGCGC GCCGAGCCCC
GATTTTCGCT ACCACTGGAC CGCGATCGAC GGCCGCCGCA CCTACCGGAT CTGGGGCAGG
CGCGGCAACA CGCGCTGGCT CGACATCCAG GCGCAGCATG GCTGGTGGGG CGACGTCGAC
CAGCGCAACC TGGCCAATTG GGACATCGAC GAGTTCGATC TGGGCCCGGA CGGCAGCTTC
GAGGCGATCG CCTCGGCCGA TCCGCAGCCC GGCAACTGGA TGAAGCTCGA CCGCGACAGC
CACAATATCT GCCTGCTGGT GCGCGACGTG TGGGACGACT GGGCCAATGC CGACGGCGCC
ACCATCCACA TCGAATGCAT CGACCGCGAT CCCGCCGACA CCGTGCTGCT GAGCGAGGCG
CAGATCGCCG AGCGGCTCGG CAAGATCGCG CATATGACCA GCTTCTCGGT CGACTGGTAC
CAGGACATGT CCGACACGGT GCTGCGCGAG GCGGGCGGGC CCAACCGGCT GTGGCTGCCG
ACCCTGTCGG TCTCGAACGT CGGCGGCAAT CCGCGCGCGG TCTACATCCA GATGATCTAC
GACCTGGCCG AGGACGAGGC GCTGATCATC GACAGCGAGA TTCCCGACTG CAAATATTGG
TCGCTGCAGC TCGCCGACCC CTGGTTCCAG ACCACCGACT ATCGCTTCCA CGCCAGCTCG
ATCAACGACA AGCAGGCGCG CCGCGACGCC GACGGCCGGG TGCGGATCGT GCTGAGCCCG
CGCGATCCCG GCGTGCCCAA CTGGGTCGAC ACGGCGGGCC TGCTCAAGGG GCTGGGGATG
TGGCGCTGGT ATCTCTCGCC CAGCCATCCG GTGCCGGCGA CCCGCAAGGT CAGGCTGGCC
GAGGTGCGCG ATCATTTGCC CGCCGATACG CCGATCGTCT CGTCCGCCGA GCGCGCGGAA
ATGCTGGCGA CCCGCCAGGC CCAGGTGGCG CGGCGGTTCG GTTTCTGA
 
Protein sequence
MTGTDAAWAD YQRVIDEART RAMTSSWAST PQLRAQAAYY ISMLQAFGFN LYMAPRQAYP 
TFFSHTIFTP VEYQWGAPSP DFRYHWTAID GRRTYRIWGR RGNTRWLDIQ AQHGWWGDVD
QRNLANWDID EFDLGPDGSF EAIASADPQP GNWMKLDRDS HNICLLVRDV WDDWANADGA
TIHIECIDRD PADTVLLSEA QIAERLGKIA HMTSFSVDWY QDMSDTVLRE AGGPNRLWLP
TLSVSNVGGN PRAVYIQMIY DLAEDEALII DSEIPDCKYW SLQLADPWFQ TTDYRFHASS
INDKQARRDA DGRVRIVLSP RDPGVPNWVD TAGLLKGLGM WRWYLSPSHP VPATRKVRLA
EVRDHLPADT PIVSSAERAE MLATRQAQVA RRFGF