Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0329 |
Symbol | |
ID | 5200886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 350535 |
End bp | 351617 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640579869 |
Product | hypothetical protein |
Protein accession | YP_001260838 |
Protein GI | 148553256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0029643 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATC TGCGGCTGCC GCTGCTGCCG GAGGAGGTGA CGGCCGCCTG GCTGGGCGAG GCGCTGTCCG TCTATGCGCC CGGCATTGTC GTCGAGCGGA TCGAGGTCAC CGATATCCTC TGGGGCACCG GCACCAAGAT GATGATCACC GCCGCCTATG ACCGGGCCGG CCGCGATGCG GGCCTGCCCG AGCGATTGTG CGTCAAGGCC GGGCTCGCCG AGCATCGCGA GCTGGTCAAA TTCTGCTACC AGACCGAAGC CCGCTTCTTC GCCGAGGTCG CGCCCCGCCT GTCGATCGGC CTGCCGCGCT GCTTCTTCGC GGCGGCCAAT GCCGATCAGG GCGTCGTGAT CATGGAGGAC CTGCGCCCGG CCGGCGCGCA GATCTGCCGG GTGCAGCAGC CGCTCTCCCG CGACCAGGCC GCCGCCTTCC TCGACGATCT GGCGGCGCTC CACGCGCGGT GGTGGAACGG CCCGGCGCTG GCCGACGGGG GCGAACTGGG CTGGCTGATG CGGCACGATC CGCTGCCCGA CGCGGCGTGG GGCGATTTCG GGCGCGGTCA GCTCCAGCCC GAGACCTGGG CGCATTATAT GGGCCTGCCG CGCTCGCTCG GCATCCCGCG CGTCTGCCGT GACCGGGAGA CGATGCACGC CGCGCTCCAG GCGCTGCGCC GCTTCGCGCC CGGTGGGCCG ACCTGCGTGA TCCATGGCGA CGCGCATCTT GGCAACATGT ACCTCGACGC CGCGGGGCGG CCTGGCTTCC TCGACTGGCA GACCGCGCGG CGCGGCCATT GGGCGCAGGA CGTCACCTAT TTCTACGTGT CGGCGCTCGA CCCGCTCGAT CGCCGCGCCT GGGAGCGCGA TCTGATCGCG GGCTATCTCG CCGCGCTGGG ACGGCATGGC GTGGCCGACG CGCCGGGCGA GGCGGAAGCC TGGGCGGCGA TCCGCGCGCA TATCGTCTAC GGCCTGTTCT ACTGGATGGT GAACCCCGTC GAATGGCAGG CCGAGGAGAA TAATGCGGCC GTGGCGCCGC GCTTCGGCTG GGCGGCGGTC GACCTCGGCG CGCCGCCGGC CGCTGCTGTG TAG
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Protein sequence | MSDLRLPLLP EEVTAAWLGE ALSVYAPGIV VERIEVTDIL WGTGTKMMIT AAYDRAGRDA GLPERLCVKA GLAEHRELVK FCYQTEARFF AEVAPRLSIG LPRCFFAAAN ADQGVVIMED LRPAGAQICR VQQPLSRDQA AAFLDDLAAL HARWWNGPAL ADGGELGWLM RHDPLPDAAW GDFGRGQLQP ETWAHYMGLP RSLGIPRVCR DRETMHAALQ ALRRFAPGGP TCVIHGDAHL GNMYLDAAGR PGFLDWQTAR RGHWAQDVTY FYVSALDPLD RRAWERDLIA GYLAALGRHG VADAPGEAEA WAAIRAHIVY GLFYWMVNPV EWQAEENNAA VAPRFGWAAV DLGAPPAAAV
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