| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0325 |
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| Symbol | |
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| ID | 5199053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 345816 |
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| End bp | 347468 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579865 |
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| Product | 3-ketosteroid-delta-1-dehydrogenase |
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| Protein accession | YP_001260834 |
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| Protein GI | 148553252 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.681292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGA CGAACTGGGA CGAGACGGCG GACTTCGTGA TCTGCGGCTC GGGCGGCGGA
TCGATGGCGG CCGCGCTGTA TCTCAAATCG ATCGGCAAGC AGCCGCTGAT CCTGGAGAAG
ACCGACAAGC TGGGCGGATC GACCGCCATG TCGGGCGGCG TGCTGTGGAT TCCCGACAAC
CATCTCCTCG CCCGCGACGG GATCGCGGAC AGCCATGAGC TGGGCCGCAT GTATATGGAC
GCGACGGTCG GCAACGATGC CGGCCCGGCC GCCTCGCCCG AGCGCAAGGA AGCCTATCTG
CGCAACGGCC CGGTGATGAT GAAGTGGCTG GAGGAGCAGG GCATGCAATG GCTCCGCACC
GAAGGCTGGG CCGATTATTA CGACGATCGG CCCGGCGGCT GCACCCGCAG CCGGTCGGTC
GGCGCGCCGA TGCTCGACGC CCGCAAGATG GGCCCGCTGT TCGACAAGCT GCGCCTCGGC
CCGATGGTGA TGCCGCTGCC GACCGACAAG GCGGGGATCA TCGGCCTCGC CACCCGCACG
CCGAGGGGCA TGTGGGAGGG CATGAAGCTG CTGTTCCGCA TGTGGCTGGT GAAGAAGCGC
GGCGCGCCGC TGCTCAGCTT CGGCGGCGCG CTCCAGGGCC GCATGCTGAT GCTGGCCGAC
AAGGCTGGCG TCGACATGCG GACAGGCCAT GGCGTCGTCG AACTGGTCGA GGAGAAGGGG
CGGATCACCG GCGTCGTCGT CGAGCATGAG GGCAGGACGC TGCTGATCGG CGCCCGCGAC
GGCGTGCTGA TCAACGCGGG CGGCTTCTCG AAAAATGCCG AGATGCGCAA GAAATACGGC
CCGCAGCCCA GCTCGGTGGA ATGGACCAAC GCCAATCCCG GCGACACTGG CGAGATGATC
GAGATCGCCG AGAGGCACGG CGCGGCGCTC GACCTGATGG ACCAGGCCTG GTGGGTGCCC
GGCACGATGG TGCCCGAGGG CGGCCCCGCC AACATGCACA ACACCGACAT CTCCAAGCCG
CACTGCATCA TCGTCAACCG CCAGGGGCGG CGCATCCTCA ACGAGAGCGG CTCCTATATG
GAGAACGGCC AGCGGCTCTA CCGGAACGAC GTGCCGGCCT ATGTCATCCT CGATAGCCGC
CACCGCAAGC GCTATGCCTG GGGCTATTAT CCGCCGGGCA AGACGCCGCA GTCCTGGCTC
GACAGCGGGA TGATGAAGAC CGCCGACACG ATCGAGGAGC TGGCCGCGAA GGCGGGCATC
GATCCGGTTG GGCTCAAGGA CGAGATCGCC AAGTTCAACC GCTATTGCGA GACCGGCAAG
GACCTCGACT TCAATCGCGG CGGGCGTGGC TACGACAACT GGTTCGGCGA TCCGACCGTC
AAGCCCAACC CCAATCTGGG CAAGATCGAC AAGCCGCCCT TCCATGTGAT GGAGATGGTG
CCCGGCGACG TCGGCACCAG CGGCGGCATG CTGACCGACG AACATGCGCG GGTGCTCCGC
GCCGACGGGT CGGTGATCGA GGGGCTCTAC GCCACCGGCA ATTCGACTGC CTCGGTGATG
GGGCGCTGCT ATCCGGCGGC GGGCGCGAGC ATCGGCGCCT CGTTCGTCTT CGCCTGGATC
GCGGCGCACC ATGCCGTCGG CGCCAACGAT TAG
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| Protein sequence | MAATNWDETA DFVICGSGGG SMAAALYLKS IGKQPLILEK TDKLGGSTAM SGGVLWIPDN
HLLARDGIAD SHELGRMYMD ATVGNDAGPA ASPERKEAYL RNGPVMMKWL EEQGMQWLRT
EGWADYYDDR PGGCTRSRSV GAPMLDARKM GPLFDKLRLG PMVMPLPTDK AGIIGLATRT
PRGMWEGMKL LFRMWLVKKR GAPLLSFGGA LQGRMLMLAD KAGVDMRTGH GVVELVEEKG
RITGVVVEHE GRTLLIGARD GVLINAGGFS KNAEMRKKYG PQPSSVEWTN ANPGDTGEMI
EIAERHGAAL DLMDQAWWVP GTMVPEGGPA NMHNTDISKP HCIIVNRQGR RILNESGSYM
ENGQRLYRND VPAYVILDSR HRKRYAWGYY PPGKTPQSWL DSGMMKTADT IEELAAKAGI
DPVGLKDEIA KFNRYCETGK DLDFNRGGRG YDNWFGDPTV KPNPNLGKID KPPFHVMEMV
PGDVGTSGGM LTDEHARVLR ADGSVIEGLY ATGNSTASVM GRCYPAAGAS IGASFVFAWI
AAHHAVGAND
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