| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0322 |
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| Symbol | |
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| ID | 5199050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 340991 |
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| End bp | 343237 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579862 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase |
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| Protein accession | YP_001260831 |
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| Protein GI | 148553249 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.672087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGGC GGCCGGACAA AGCTTCACAT TCTCGATACC TCCGCCCGGC TCCGGCGCTT
TGCTTGACAG TGCGGGCGCC GGATAGCTTC TGCGGGGGCA GGACTATAGC CAGCACGGGG
CCCGACCAAG CCATCATGAC CCAGGTAAAC GAGAAGATCT CCACGCGCGT CGAAGGCGAC
ATCGGTTTCA TCCGCAGCGA CAACCCGCCG GTCAACGCGC TCGGACAGGC GGTGCGCAGC
GGCGTCGTCG AGGCGCTCGA TCGGCTGAAC GCCGACCCCG CGGTCAAGGC GATCGTGCTC
CATTGCGAAG GCCGCACCTT CTTCGCCGGC GCCGACATCA CCGAGTTCAA CAAGCCGCGC
GTGCCCCCGA CCCTCCAGGA GATGATCCTC GCGATCGAGA ACTCGCCCAA GCCGGTGGTC
GCCGCGGTCC ACGGCACCGC GCTGGGCGGC GGCTTCGAGA CCGCGCTCGG CTGCCCGTTC
CGCGTCGCCG TCCCCTCGGC CAGGATGGGC CTGCCCGAGA TCAACCTGGG CCTGTTCGCC
GGCGGCGGCG GGACGCAGCG GCTGCCGCGC ATCATCGGTC CGGAGAAGGC GCTCGAATTC
GTGCTGTCGG GCAAGCCGGT GGGCGCCGCC CAGGCGCTGG CGCTCGGCAT CCTCGACGCG
GTCGAGGACG GCGCCCCCGA TGCGATCGGC GCGGCCTTCG CCCGCCGGGT GATCGACGAG
AAGCTGCCGG CGGTGGCGGT CAGCCGCCGC GACGACAGGA TCGCCGCGAC CCGCGCAGAT
CCGAGCGCCT TCGACGCGCT CGCCGCGAAG CTCACCGCGC GCAGCAAGGG CCAGGAGGCG
CCGGCCGCCA ACGTCGCCGC GGTCCGCCGC TCCTTCACCC TGCCCTTCGA CGAGGCGATG
GCGATCGACG CCGAGGCCAA TCGCGCGCTG ATGGCGGGCA GCCAGTCGCG CGCACTGCGC
CACCTGTTCT TCGCCGAGCG GGAGGCCGCC CGGATTCCCG GCCTGCCCAA GGACGCCAGG
GCGCGCGACG TCGCCAGCGC GGCGATCATC GGCGCGGGCA CGATGGGCGG CGGCATCGCG
ATGTGCTTCG CCGGCGCCGG CATCCCCGTC GTCATCGTCG ACACGACGCA GGAGGCGCTC
GATCGCGGCA TGGAGCGGGT GCGCGCCAAC TACGCCACCT CGGTCAAGCG CGGCTCGATC
AGCCAGGAGC AGGTCGACAA GCGCCTGGCG CTGATCACCC CGGCGACCGA CCGCGCCGCC
GTCGCCGACG CCGACCTGGT GATCGAGGCG GTGTTCGAGG ACATGGCGGT CAAGAAGGAG
ATATTCTCCG ACCTGGAGAA GCGGGTGAAG CCGGGCACGG TGCTCGCCTC GAACACCTCG
GCGCTCGACG TCGACGAGAT CGCCGCGGCG CTCGACCGGC CCGAGGATTT CGTCGGCATG
CACTTCTTCT CGCCGGCCAA TGTGATGAAG CTGCTGGAGG TGGTGCAGGC GGCGAAGAGC
AGCCCGGAGG CGATCCTCAC CGCGATGGCG GTCGGCCGCA AGATAGGCAA GGTGCCGGTC
TGGTCGGGCA ATTGCGACGG CTTCATCGGC AACCGGATGG TCGCCAAGCG CTCGGCCCAG
GCCGAACGGC TGCTCCAGCG CGGCGCCTTC CCGCCGCAGG TCGACGCGGC GCTCACCAAG
CTCGGCTTCC CGATGGGGCC GCTGACCACC AACGACATGT CGGGCCTCGA CATCGGCTAT
GCGATCCGCA AGCGGCGCGG CACGCCCTTC CCGATCGCCG ACGCGATCGT CGAGAGCGGG
CAGCTCGGCC AGAAGACCGG ATCGGGCTAT TATCGCTACG AGCCGGGCGA CCGCACCCCC
CGCCCCAACC CCGACACCGA CGCGCTGATC GTCGCCACCT CGGCGAAGCT GGGCATCGAG
CGGCGCGAGA TGTCGGAGGG CGAGATGGTC GAACGGCTGC TGTTCCCGCT GATCAACGAG
GGCGCGCGGA TCGTCGAGGC AGGCATCGCG CTGCGGCCGT CCGACGTCGA TCTGGTCTGG
ATCAACGGCT ATGGCTGGCC GCGCCACCTG GGCGGCCCGA TGTTCCACGC CGACGAGACC
GGGCTGGCGC ACATCGTCGC CCGCCTGCGG GAGTTCGCCG CCGACACGCC CGACGATCCC
TCGCTCGAAC CCGCGCCGTT GCTGGTCGAG CTGGCCGCGA AAGGACAGGG TTTTTCCGAA
TGGCAGAAGA GCCGCGCCGC GGCCTGA
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| Protein sequence | MRRRPDKASH SRYLRPAPAL CLTVRAPDSF CGGRTIASTG PDQAIMTQVN EKISTRVEGD
IGFIRSDNPP VNALGQAVRS GVVEALDRLN ADPAVKAIVL HCEGRTFFAG ADITEFNKPR
VPPTLQEMIL AIENSPKPVV AAVHGTALGG GFETALGCPF RVAVPSARMG LPEINLGLFA
GGGGTQRLPR IIGPEKALEF VLSGKPVGAA QALALGILDA VEDGAPDAIG AAFARRVIDE
KLPAVAVSRR DDRIAATRAD PSAFDALAAK LTARSKGQEA PAANVAAVRR SFTLPFDEAM
AIDAEANRAL MAGSQSRALR HLFFAEREAA RIPGLPKDAR ARDVASAAII GAGTMGGGIA
MCFAGAGIPV VIVDTTQEAL DRGMERVRAN YATSVKRGSI SQEQVDKRLA LITPATDRAA
VADADLVIEA VFEDMAVKKE IFSDLEKRVK PGTVLASNTS ALDVDEIAAA LDRPEDFVGM
HFFSPANVMK LLEVVQAAKS SPEAILTAMA VGRKIGKVPV WSGNCDGFIG NRMVAKRSAQ
AERLLQRGAF PPQVDAALTK LGFPMGPLTT NDMSGLDIGY AIRKRRGTPF PIADAIVESG
QLGQKTGSGY YRYEPGDRTP RPNPDTDALI VATSAKLGIE RREMSEGEMV ERLLFPLINE
GARIVEAGIA LRPSDVDLVW INGYGWPRHL GGPMFHADET GLAHIVARLR EFAADTPDDP
SLEPAPLLVE LAAKGQGFSE WQKSRAAA
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