| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0312 |
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| Symbol | |
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| ID | 5199000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 329570 |
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| End bp | 331306 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579852 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001260821 |
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| Protein GI | 148553239 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.268832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG AATTTGACAT CGTGATCCGT GGCGGCACCG TCGTCGACGG CACCGGCGCG
CCCGGTTTCC AGGCCGACGT GGCGATCAGC GACGGCGCCA TCGCCGCGGT CGGCACGGTG
GCGGGCAAGG GCCGCGAGGA GATCGACGCG ACCGGCCTGA CGGTGACGCC GGGCTTCGTC
GACGTCCACA CCCATTATGA CGGCCAGGTC ACCTGGGAGA ACACCCTCGC GCCGTCCTCC
AACCATGGCG TGACGACGGT GGTGATGGGC AATTGCGGCG TCGGCTTCGC GCCGTCGCGG
CCCGAGCATC GCCAGCTGAT GGTCAAGCTG ATGGAAGGCG TCGAGGACAT CCCCGAGGTG
GTGATGACCG ACGGCGTCCC CTGGAAGTGG GAGACCTTCC CCGAATATCT CGACTTCCTC
GACACCCGGC GCACCGACGT CGATTTCGCC GCCCAGCTGC CGCACAGCCC GCTGCGCGTC
TATGTGATGG GCGAGCGCGG CACCAATCTG GAGCCGCCGA CCGAGGCCGA CCTGGCCGAG
ATGCGCCGCA TCACCCGCGA GGCGATCGAG GCCGGCGCGC TCGGCGTCAC CACCTCGCGC
CAGCTCGCGC ACAGCTTCCG CGACGGCCGC CCCGCCCCCT CGACCAAGAC CGAGGTCGAC
GAGCTGAAGG CGCTGGCCGG GGGCCTGAAG GACGCCGGCG CCGGCGTGTT CCAGATCATC
CCCAACACCA ACCTGCCGAC CCCGCACGAA TGGGAGGTCA TCGAGACGCT CAACGAGACG
TCGGGCGGCA AGTCGGTCAA TTTCAGCCTG TTCACCGGAT CGCAGGTGGT CGGCGGGCCC
GAGCCGCTGC TCGAGGGCCT CGCCCGGGCC AAGCAGGACG GACGCCGCAT CCAGGGCCAG
TTCTTCCCGC GCCCGATCGG CATGCTGTTC GGGATCGAGC TGAGCTACCA CCCCTTCTCG
CTCAACCCCA GCTACAAGCA GATCGAGCAT CTGCCGCTGG AGGAGAAGGT CGCGCGGATG
CGCGATCCCG CCTTCCGCCA GCAGCTATTG TCCGAGCAGC CCGAGGACCC GAACCCCTTC
TTCCTCTGGG TCGTCCAGCA GACCCACATC CTGTTCCCGC TCGGCGATCC GCCCAACTAC
AACCCGCACC CGAGCGACAG CATCAAGGCG CGCGCCGAGA CGCTGGGCAT CGACGAGCGC
GAGCTGATGT ATGACGAGCT GCTGCGCCAG AACGGCAAGG CGATCATCTA CTGCCCGATG
GGCAATACCG AGAACAACCG CTTCGACGCG GCGGTCGACC TGTTCGGCAA GCCGGGCACG
GTGCTGGGCC TGGGCGACGG CGGCGCGCAT TACGGGATGA TCTGCGACGC GGCCTATCCG
ACCTACATGC TGTCCGAATA TGTCCGCGAC AGCCACAAGA TGCCGATCGA GCAGGCCGTC
AGCATGCTCA GCCGCGAGAC CGCCGAGACC GTCAACCTGT TCGATCGCGG CGTGATCAAG
CCCGGCTACA AGGCCGATCT CAACCTGATC GACCTCGACC GGCTGCACCT CTACGCGCCG
CGCGTGAGGC ACGACCTTCC CGCCGGCGGC AAGCGGCTCA GCCAGCAGTC GGACGGCTAT
GAGGCGACGA TCGTCTCGGG CGAGATCACC TATCGGCGCG GCCGCCCGAC CGGCAGGCTG
CCGGGCCGGC TGGTCCGCCA CGGCCGCCCC GCGCCCGCGC TGGCCGCCGC CGAATAG
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| Protein sequence | MSAEFDIVIR GGTVVDGTGA PGFQADVAIS DGAIAAVGTV AGKGREEIDA TGLTVTPGFV
DVHTHYDGQV TWENTLAPSS NHGVTTVVMG NCGVGFAPSR PEHRQLMVKL MEGVEDIPEV
VMTDGVPWKW ETFPEYLDFL DTRRTDVDFA AQLPHSPLRV YVMGERGTNL EPPTEADLAE
MRRITREAIE AGALGVTTSR QLAHSFRDGR PAPSTKTEVD ELKALAGGLK DAGAGVFQII
PNTNLPTPHE WEVIETLNET SGGKSVNFSL FTGSQVVGGP EPLLEGLARA KQDGRRIQGQ
FFPRPIGMLF GIELSYHPFS LNPSYKQIEH LPLEEKVARM RDPAFRQQLL SEQPEDPNPF
FLWVVQQTHI LFPLGDPPNY NPHPSDSIKA RAETLGIDER ELMYDELLRQ NGKAIIYCPM
GNTENNRFDA AVDLFGKPGT VLGLGDGGAH YGMICDAAYP TYMLSEYVRD SHKMPIEQAV
SMLSRETAET VNLFDRGVIK PGYKADLNLI DLDRLHLYAP RVRHDLPAGG KRLSQQSDGY
EATIVSGEIT YRRGRPTGRL PGRLVRHGRP APALAAAE
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