| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0296 |
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| Symbol | |
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| ID | 5198590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 312659 |
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| End bp | 313564 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579836 |
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| Product | palmitoyl-CoA hydrolase |
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| Protein accession | YP_001260805 |
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| Protein GI | 148553223 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.707946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG GCGGGACCGG GCAGGCCGGC GACGCGGCGA TGCGCGTTTC GGCCGGCGAG
ATACTGGCGA TCGAGCCGGC GGGCGGGGAT CGCTTCATCG GCGGCGCGGG CGGCGTCAAC
CATATCGGCA CCGTGTTCGG CGGCCGTCTG GTCGCGCAGG CGCTGCTGAG CGCGGTGCGC
ACCGTCGCGG CGATGCCGCC GACTTCGCTG CACGGCTATT TCCTGGCACC GGCGCAGGTC
TCGCTGCCGA TCGAATATCG GGTCGCGCGG CTGCGCGACA GCCGGCGCTT CGCCCATCGC
CAGGTGACGG CGGTGCAGGA GGGGCGAGCG GTGTTCACGC TGCTCTGCCA GTTCCACGCG
CCCGAGGACG GCTTCGTCCA CCAGGCGGCG GAGATGCCCG ACGTGCCGCC GCCGGAGGAG
GTCGCGACCC TCCAGCAGTT CGTGCGCGAC AATGGCGACC GGCTCGATTT CGCGGCGATC
CGCAACTTCT CCGGCGCGCT GCCGATCGAG ATGCGCGCGA TCGCGCCCGA AGCCTATTTC
TACGAGCGGC CACGGGAGCC GATGCGCGAC TTCTGGTTCC GCCTGCCCGG CGCGGCGGCG
ATCGACGATC CGCGCGAACA GGCCTGCCTG CTCGCCTATG CCAGCGACTA TTGGCTGGCG
GGGGTGTCGG CGACGCCGCA CGGCTTTCCC ACCAATAGCA GCTCGTTGCT GATCTCCAGC
CTCGACCACG GCCTGTGGTT CCACCGTCCG GTGCGCTGCG ACGAGTGGTT GCTCCATCAC
ACGCACAGCC CCGCTGCCGC CGACGGCCTG GGCTTCGCGC AGGGGCGGAT CTTCGATCGG
GAGGGACGAC TGGTGGCGTC GACCACACAG GAATGCCTGC TGCGCCAATT ACCGCCGGAA
GCATAA
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| Protein sequence | MADGGTGQAG DAAMRVSAGE ILAIEPAGGD RFIGGAGGVN HIGTVFGGRL VAQALLSAVR
TVAAMPPTSL HGYFLAPAQV SLPIEYRVAR LRDSRRFAHR QVTAVQEGRA VFTLLCQFHA
PEDGFVHQAA EMPDVPPPEE VATLQQFVRD NGDRLDFAAI RNFSGALPIE MRAIAPEAYF
YERPREPMRD FWFRLPGAAA IDDPREQACL LAYASDYWLA GVSATPHGFP TNSSSLLISS
LDHGLWFHRP VRCDEWLLHH THSPAAADGL GFAQGRIFDR EGRLVASTTQ ECLLRQLPPE
A
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