| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0295 |
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| Symbol | |
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| ID | 5198589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 311704 |
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| End bp | 312666 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579835 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260804 |
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| Protein GI | 148553222 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGGA TCGACTTCAG CGGGCAGGTG GCGGTGGTGA CCGGCGCGGG CGGGGCGCTC
GGCGGCGCCT TCTGCCGCGA GCTGGCGCGA CGCGGGGCGG CGGTCGTCGC CAACGACCTG
GGCGGCAGCA CCACCGGCGA GGGCGGGTCG GCCGACTATG CCGACGCGAT CGTCCGCGAG
CTGCGCGCGG CGGGCGCAAG GGCGGTCGCG AATTACGACA GCGTCGCCTC GGCGGCCGGC
GGCCAGGCGA TCGTCGATAC CGCGCTCCGG CATTTCGGCC GGGTCGACAT CGTCATCAGC
AACGCCGGCA ACCAGCGCAA CGCGCCGTTC GGCACGCTGA CCGAGGAGGA TGTCGAGGCG
GTTTACGCGG TCCATGTGAA GGGCGCGTTC AACGTCTGCC AGCCCGCCTA TCGCGAGATG
GTGAGGCAGG GCTATGGCCG GCTGGTGCTG GTCGGCTCGC AATCGGGGGT GTTCGGCAAC
CCGATGCGCG CCAATTACGG ATCGGCCAAG ACGGCGATGA TCGGGTTGAT GAACGTGATC
GCGCAGGAGG CGCCCGCCGG TATCGCGGTC AACACGCTGT TCCCCAACGC GCAGGGCGGG
CGGCTCGGCG GCACGCCGCT GGCCGAGCGG CCCGACATCG ATTTCCTCAA GGCGGCGGGG
GAGCGGACCC GCCACTTCGC CGACGCGATG AAGCCCGAGT TCGTCGCGGC GCTGGCCTGC
TACATGGCGA GCCGCCAGTG CGACGGATCG CAGAACATGT ATTCGGTGCT GGGCGGCAAA
TATTCGCGGC TGTTCATGGG GCTGACCGAG GGCTGGTACG CGCCGGGCCC CGACGCGCCG
AGCTGCGACG ACATCCTCGC CCATATCGGC GAGATCGACG ATCGCAGCCG CTATGCGGTG
CCGTTGAGCG GGCTCGACGA GATGGACACG GTGCTCGCGG CGCAGCGCGC GGCCCATGGC
TGA
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| Protein sequence | MDRIDFSGQV AVVTGAGGAL GGAFCRELAR RGAAVVANDL GGSTTGEGGS ADYADAIVRE
LRAAGARAVA NYDSVASAAG GQAIVDTALR HFGRVDIVIS NAGNQRNAPF GTLTEEDVEA
VYAVHVKGAF NVCQPAYREM VRQGYGRLVL VGSQSGVFGN PMRANYGSAK TAMIGLMNVI
AQEAPAGIAV NTLFPNAQGG RLGGTPLAER PDIDFLKAAG ERTRHFADAM KPEFVAALAC
YMASRQCDGS QNMYSVLGGK YSRLFMGLTE GWYAPGPDAP SCDDILAHIG EIDDRSRYAV
PLSGLDEMDT VLAAQRAAHG
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