Gene Swit_0291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0291 
Symbol 
ID5197840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp307756 
End bp308898 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID640579831 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001260800 
Protein GI148553218 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCGAACCGCT GCTGCGGCCC TTCGCGCTGC GCGGGCTGGA ACTGCCCAAC 
CGCGTCGTGA TGGCGCCGAT GACGCGCTAC CGGTCGCCGG CCGGGGTGCC GACCGGGGAG
GTGGCGAGCT ATTATGCCCG GCGCGCGGCG ACCGGCCTGG GCCTGATCCT GACCGAGGGC
GTGGCGCTGC CGCATTATGC CGCCGCCGAC CATCCCGACA TCCCGCGCAT CGACGGGGTC
GAGGTGCTGG AGGGCTGGCG CAAGGTGATC GAGGAGGTCC ATGCGGCCGG CGGGCGGATC
GTGCCGCAGC TCTGGCACCA GGGGCCGATG TGGAACGTCG AATATGCCGG CCCCGGCACC
GGCAATCCGA TGCGGCCGTC GGGGATATGG GGCCCTGCCG ACGGGGTGAT CTCCTTCCGG
CCCGAAGGCC GCGACGCCAG CCTGGCGCCG GTGCCGCCGA TGACCGATGG CGACATCGCC
GACGTGATCG CTGCCTATGC GCTGGCGGCG CGCAACGCGG TGGCGCTGGG CGCCGACGGC
ATCGCGATCC ATGGCGCGCA CGGCTATCTG ATCGACACCT TCCTGTGGGA TTACACCAAC
CGGCGCGACG ACCGGTGGGG CGGCGATCCG GCCCGCCGCG CGGCGTTCGG GGCGGAGGTG
GTCCGCGCCA TCCGCGCCGA GATCGGCGAG GACCGCCCGA TCGTGCTGCG CTTCTCGCAG
TTCAAGATGC AGAACTACCA GGCCCTGCTC GCCGACACGC CCGACGCGCT CGGCGCGCTG
CTCGGCCCGC TCGCCGATGC CGGGGTCGAC CTGTTCGACG CCAGCCAGCG CTATTTCGAC
ACGCCGACCT TCGAGGGATC GACCCTCAAC CTCGCCGGCT GGGCGAAGAA GCTCACCGGC
AAGGCGTCGA TGACGGTGGG CGGCGTCGCG CTCGACAAGG CGCGGGGCCA TGCGAAACAT
ATCGACGACA GCCAGCAGTC GGTGAACAAC CTGTCGCTGC TGGTCGAGCG GTTCGAGCGT
GGCGAGTTCG ATCTGGTCGC GGTCGGCCGG GCGATCCTCA ACGATCCGGC CTGGTTCACC
AAGGCGGTGG CGGGCGAGCC CTTCCTGCCG TTCGATCCCG CCAGCCTGGA GCGGCTGACA
TGA
 
Protein sequence
MSAIEPLLRP FALRGLELPN RVVMAPMTRY RSPAGVPTGE VASYYARRAA TGLGLILTEG 
VALPHYAAAD HPDIPRIDGV EVLEGWRKVI EEVHAAGGRI VPQLWHQGPM WNVEYAGPGT
GNPMRPSGIW GPADGVISFR PEGRDASLAP VPPMTDGDIA DVIAAYALAA RNAVALGADG
IAIHGAHGYL IDTFLWDYTN RRDDRWGGDP ARRAAFGAEV VRAIRAEIGE DRPIVLRFSQ
FKMQNYQALL ADTPDALGAL LGPLADAGVD LFDASQRYFD TPTFEGSTLN LAGWAKKLTG
KASMTVGGVA LDKARGHAKH IDDSQQSVNN LSLLVERFER GEFDLVAVGR AILNDPAWFT
KAVAGEPFLP FDPASLERLT