| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0289 |
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| Symbol | |
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| ID | 5197838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 305532 |
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| End bp | 306761 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640579829 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001260798 |
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| Protein GI | 148553216 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.158157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.780487 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGAC TACCCCTCGA GAATATCCGC GTCCTCGATC TCACCCGCGT GCTGGCGGGC
CCGTTTGGAT CGCAAGTGCT CGCCGACATG GGCGCCGACG TGATCAAGAT CGAGCGGCCG
GTGGTGGGCG ACGACGCCCG CATCTTCGGC GAGCCCTATC TGCGCGACAC CGAAGGCAAC
CGCACCCGCG AGAACGCCTT CTACATGTCG GTGAACCGCA ACAAGCGGTC GGTGGCGCTC
AACATCGCCT CCGCGCGCGG GCAGGCGCTG ATCCGCGAGC TGGTCCTGTC GTGCGACGTG
GTGATGGAGA ATTACAAGGT CGGCGACCTC AAGCGCTACG GCCTCGACTA TGAGAGCCTG
AAGGCGATCA ACCCGCGCAT CGTCTACTGC TCGGTCACCG GCTACGGCCA GACCGGGCCG
CTCGCCGCCA AGCCCGGCTA TGACGCGGTG TTCCAGGGCG AATGCGGGCT GATGAGCGTC
ACCGGCGTGC CCGACGGCAA GCCCGGCGCC GGGCCGATGA AGGTCGGCCC CAGCATCATC
GACCTGTTCA CCGGCCTCAA CGTCGCCAAC GCGATCCTCG CCGCGCTCTA TCATCGCGAC
GCCGCCGGCG GCGAAGGCCA GTATATCGAC GTCGCCCTGC TCGACTGCGG CATCTCCGCC
CTGTCGCACT ATGCCCAGAT CCACCTCACC TCGGGCGAGG TCCCGGTGCG GCGCGGCACC
CAGGGCAATG GCGGCATGCC GACCAGCAAA TTCGCGTGCA GCGACGGGGC GATCATGATC
ACTTCGGGCA ACGACAAGCA ATATGTCGCG CTGTGCGACG CGGTCGGCCA TCCCGAGCTC
GCCACCCATC CGCGCTTCCA CACCAATGTG CTGCGCGTCC AGCATCGCGA CGAGATCACC
GAGGTGTTCG ACGCGATCTT CGCCACCGAC ACGGTCGCCC ACTGGCTGGA GAAGCTGGGC
GCGGCCGGCA TCCCCAGCGG CCCGATCAAC GACCTGGAGC AGGTGTTCGA CTATCCCCAG
GCGCGGCACC GCGGCATGCG CGTCCGCGCG CCGCACCCGC TCAAGCCCGA TCTCGACCTG
ATCCGCAGCC CGCTCAACTT CTCCGAGACG CCGATCACCG ACTATCGCGC CCCGCCGATG
CTGGGCGAGC ATACCCGCGC CGTGCTGGCC GGGGAGCTGG GCCTGAGCGA GGCCGAGATC
GACGCGCTCG GGGACGAAGG GGTGATTTGA
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| Protein sequence | MARLPLENIR VLDLTRVLAG PFGSQVLADM GADVIKIERP VVGDDARIFG EPYLRDTEGN
RTRENAFYMS VNRNKRSVAL NIASARGQAL IRELVLSCDV VMENYKVGDL KRYGLDYESL
KAINPRIVYC SVTGYGQTGP LAAKPGYDAV FQGECGLMSV TGVPDGKPGA GPMKVGPSII
DLFTGLNVAN AILAALYHRD AAGGEGQYID VALLDCGISA LSHYAQIHLT SGEVPVRRGT
QGNGGMPTSK FACSDGAIMI TSGNDKQYVA LCDAVGHPEL ATHPRFHTNV LRVQHRDEIT
EVFDAIFATD TVAHWLEKLG AAGIPSGPIN DLEQVFDYPQ ARHRGMRVRA PHPLKPDLDL
IRSPLNFSET PITDYRAPPM LGEHTRAVLA GELGLSEAEI DALGDEGVI
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