| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0287 |
|---|
| Symbol | |
|---|
| ID | 5197836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 303857 |
|---|
| End bp | 305008 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640579827 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260796 |
|---|
| Protein GI | 148553214 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.295688 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.52564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGG CGGACCTGCT CGCGCCCGAG ACGATGCTCG CGGCCTCGAC GGCGCGCACC
GGCCTGTCCG ACTTCGGCGA TCCCGGCTTC CGCGAAGGGT TCGACCGGCT GCTGTCCGAC
ATCCGCGCGC TCGACCTGCC CGAGGCCTTC GCCCAGGCGA CCGCCTTCCG CATCGGCCAG
TTCCTCGACG CGCGCGCGCT GGCGGTCGAC GGGTTACGCC GGCATGGCGA GGTGCTGGCG
ACGCCGGTTC GCCGGCCGCT GATCATCGCC GGGCTGGTCC GTTCGGGCAC CACCGCGCTG
CATCAGCTCC TCTCGCTCGA TCCGCAGTTC CAGGGCCCCG AGCATTGGCT GACGGTGGCG
CCCAAGCCGC GCCCGCCGCG CGACCGGTGG CAGGACGATC CGCACTATCG CGCCGTCGCC
GATTCGATCG CCGCCTTCGT GGCGAGCGCC CCCGAGATGC TCGACGACCA TATGATGTCG
GCGGACGGCA TCGAGGAATC GCTGTTCATC CTCGCCACCG GCTTCGCCAG CAACATGTGG
CCGTCGATGT GGCCGGTGCC GCGCTACGAC CTCTGGTATC GCGACCGCGA CGACCGCGAC
AGCTATCGCT GGCTGGCCGA CGTGCTGCGG CTGATCGGCA AGGGCGACGA CCGCCGCTGG
CTGCTCAAGA ACCCGACCGA CCTCTTCTCG CTCGGCGAGG TGCTGGACGT CTTCCCCGAC
GCGATGATCG TCCAGACGCA TCGCGATCCG GTCGAGGCGA TGCCGTCGAT CTGCAACCTG
ATCCTCGCCG CGCAGCGCGT CTTTTCGGGC GATCGCGCCG ATCCGGTGGC GATCGGCGGG
CGCGAGGCGG AGATGTGGGC GGTGGCCCTC GACCGCGCCG AGCGGGTGCG CGCCGGCAGC
GCCAACCGCT TCTTCGACAT CGAGTTCCGC GATTTCACCC GGGACCAGCT CGGCACGGTC
AAGCGGCTCT ACGATCATTT CGGCCTGACC CTCGACGCGT CGACCGAGGC GGCGATGCAG
GCCTGGCTCG ACGCCCATCC GCGCCGTGCG GCCGTTGCCG GGCCACGCTA CCGGCCCGAG
GATTTCGGCC TCACCGCCGA CGGCCTGCGC GAGCGCTTCG CCGACTATCG CGCCCGGCGC
GGCTACGCCT GA
|
|---|
| Protein sequence | MSMADLLAPE TMLAASTART GLSDFGDPGF REGFDRLLSD IRALDLPEAF AQATAFRIGQ
FLDARALAVD GLRRHGEVLA TPVRRPLIIA GLVRSGTTAL HQLLSLDPQF QGPEHWLTVA
PKPRPPRDRW QDDPHYRAVA DSIAAFVASA PEMLDDHMMS ADGIEESLFI LATGFASNMW
PSMWPVPRYD LWYRDRDDRD SYRWLADVLR LIGKGDDRRW LLKNPTDLFS LGEVLDVFPD
AMIVQTHRDP VEAMPSICNL ILAAQRVFSG DRADPVAIGG REAEMWAVAL DRAERVRAGS
ANRFFDIEFR DFTRDQLGTV KRLYDHFGLT LDASTEAAMQ AWLDAHPRRA AVAGPRYRPE
DFGLTADGLR ERFADYRARR GYA
|
|---|
| |