| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0279 |
|---|
| Symbol | |
|---|
| ID | 5196955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 296382 |
|---|
| End bp | 297269 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640579819 |
|---|
| Product | gluconolactonase |
|---|
| Protein accession | YP_001260788 |
|---|
| Protein GI | 148553206 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.27578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.327592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGG TCGAATGCGT GCTCGATATC AGGGCGGAGT CGGGCGAGAC CCCGGTCTGG
TCGGTGGCCG AGCAGCGGCT GTTCTGGGTC GACCAGCTCG CCTTCACGCT CAACGCCTTC
GATCCGGCGA CGGGGCGCAA CGAGGCCTGG ACGATGCCGG CCCATATCAG CAGCTTCGCG
ATCCGGGGCC GGGGCGGGAA GCTGCTCGTC GCGCTGCGGA CCGGGTTGTT CGACTTCGAC
CGGGCGAGCG GCGCGCTGAC TCCGGTCGCG GCGCCGCCGC CCTATGACCA GGCGGCGCTG
CGCTACAATG ACGGGCGCTG CGATCGCCAG GGGCGCTATG TCGTCGGCTC GGTCGACCTG
GACTTCTTCG AGAACCGCAT CGCCGGCCGG GCGGCGGTCT ATCGGCTCGA CGCCGCCGGC
CTGGCGCCGA TCGTCACCGG CATCACCTGT TCCAACGGGC TGGCGTTCAG CCCCGACGGG
CGGACCATGT ACCTGGCCGA TACCGTGCAG AACGCTGTGT TCGCCTATGA CTATGACGTG
GCGACCGGGA CGCCCGGCAA CCGGCGCGAC TTCGTCCGCT TCGGCCCCGA CGAGGGCAAG
CCCGACGGGG CCGAGGTCGA CAGCGAGGGC GGCTATTGGG TCGCGCTGCT GATGAAGGGC
GCGGTCGCGC GCTACACGCC CGACGGCAAG CTCGACCGGC TGATCCCGGT CCCGGTGCTG
CAGCCGACCA AGATCGCCTT CGGCGGACCG GACCTCGCCA CCCTCTACCT TACCAGCGCG
GGCCATCGCC ACATGCCCGG CGACGAGCCG CTGGGCGATC AGGCGGGCGG GCTGTTCGCG
ATCGACACCG GCTTCAGGGG GATCGCCGAG CCGCAGTTTG CATTTTAG
|
|---|
| Protein sequence | MARVECVLDI RAESGETPVW SVAEQRLFWV DQLAFTLNAF DPATGRNEAW TMPAHISSFA
IRGRGGKLLV ALRTGLFDFD RASGALTPVA APPPYDQAAL RYNDGRCDRQ GRYVVGSVDL
DFFENRIAGR AAVYRLDAAG LAPIVTGITC SNGLAFSPDG RTMYLADTVQ NAVFAYDYDV
ATGTPGNRRD FVRFGPDEGK PDGAEVDSEG GYWVALLMKG AVARYTPDGK LDRLIPVPVL
QPTKIAFGGP DLATLYLTSA GHRHMPGDEP LGDQAGGLFA IDTGFRGIAE PQFAF
|
|---|
| |