| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0277 |
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| Symbol | |
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| ID | 5197566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 292863 |
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| End bp | 295190 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579817 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001260786 |
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| Protein GI | 148553204 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.644124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.280389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACAAT CACTACACAT CGCCAGTATT GCGACCATCG CGTTCCTGAC CATGATCCCG
GTCGAGGCCC AGGCGCAGGA AGCCGCCAGG GCGGCGCCCG CCGACGAGGC GCCGGCCGCC
GGCGGCATCG ACGACATCGT CGTCACCGCC CGCCGCCGCG CGGAGCGCCT CCAGGACGTG
CCGCTCGCGG TGAGCGCAGT GTCGACCGCC GCGCTCGAAC GCGCCAACAT CCAGAACGTC
GCGCAGCTCA GCCGGCTGGT GCCCAGCCTC ACCTCGGTGC CCGGCCAGGG CGGCAGCCGC
TCGCTGCCCA ACTTCTCGAT CCGCGGCCTG TCGCAGCAGG AGCTGACGAT CCTCGCCGAC
CAATCGGTGT CGACCTATAT CGGCGACATC GTCGCGGCGC GCACCCAGGG CATCAACAGC
GCGCTGTTCG ACATCGCCTC GGTCGAGGTG CTGCGCGGTC CGCAGGGCAC GCTGTTCGGC
CGCAACACCA CCGGCGGCGC GATCATCATC CGCCCCGCCC GGCCGACCGA CGAGTTCGAG
GGACGGGTCG GCGTGACCGT CGGCAATCTC GACACCTTCA ACGTCGAGGG CATGGTCAAC
GTGCCGCTCA GCCCCAACAT CGCGATCCGC GTCGCCGGCC AGCGGCAGCG CGACGACGGC
TTCGTCTATG ACGAGATTCT CCAGCGCAAC GTCAACGACA CGAAGCAGGA GGGCGCGCGC
GCCTCGATCC TGATGCACAA CGACGATCTG GAATCGCTGA CCGTCTACAA TTATTTCCAC
GAGAATGACG GCGGCACGGC GAGCTTCCTC CAGAATGTCC GCGCCACCGG CTCGCTCAAC
GGCGCCGCGG TGCGCGCGTC GCGCGGCTAT CGCCCGCTCG AGGACCTGCT GGCCGAGCAG
CAGGCGCGCG GCATCTACCG CATCGCCAAC GGCTCGCCGA TCTTCACCAA GGTCGAGACC
CACGACATCG CCAACACCAC CAGCTTCGAC CTGTCCGAGA CGATCAAGCT GAAGAACATC
GTCGGCTATC GCCATGTGAA GGATCACATT TTCGACGACA TGGACGGCAG TTCGAACGCG
CTGCACCCGC AGGAGCGCAT CGATCGCGCC AAGCAGTTTT CGGAGGAGTT CCAGATCCTC
GGCGACACCG CCAATCTGAA CTGGATCGCC GGCCTCTATT ATTTCCGCGA GAGCGGCCGC
AACCAGGGCA TCTCGGCGGT CGGCGCGGTC GACCCGGGCC TGGTCGAGCC GGACAACGTC
GCCGCCTTCC CCGGCACGGC GTACAGCAAC ACCGACACCG CCGCGCGCAA CACCAGCTAT
GCGGCCTTCG CGCAGGGCAC CTATCGCTTC GGCGGCGGGC TCAGCCTCAC CGCCGGCATC
CGCTACAACC GCGACGAGCG CCAGGCGACG ATCCGCAACC GCACCGCGAC CGCCTGCCGC
TTCACCCGCG ATCTCGACAA TAATCCGGCG ACGCCCGAAA CCGCGGTGCC GCTGGCGCAG
TGCGAGCTCG GCGTGAAGGA CAGCTTCTCC GAGGTCACCT ACAATGTCAG CCTCGAATAT
AAGATCGCGG CGGACAAGCT GGTCTACATC GCCCATCGCC ACGGCTACCG CACGGGCGGC
TTCGGCGCCC GCGCCTCGAC CGAGGCCGGC CTGCGCCGCA CCTTCCGGCC GGAGACGGTC
GACGACGTCG AGGTCGGCGT GAAGGCCGAC TGGCGGATGG GCGACGCCTT CCTGCGCACC
AACCTCGCCG GCTATTACGC CAAGTACAAG GACATCCAGC GGCTGCTGAC CGATCCGGTG
GCGGTGCCGC CGACCACGGT GACCACCAAT GCCGGCCGGG CGCGGATCTA CGGCATCGAG
GCGGACATCC TGTTCCGCCC GGTGAAGATG ATCGAGCTGA CCGCGAACTA CGCCTATACC
AACGCGAAGT TCACCAAGTT CATCTATCCG GACGGCACCG ATCACTCGAA CGATCCGTTC
GCCCGTGCGC CGCGCAACGT CTACACGCTG GGCGCCCGCC TGCTCGCGCC GCTCGACGAG
GGCCAGGGCG ACGCCTCGGT CGGCGTCAGC TACTACCACA CCGGCGACTA TAGCGGGAAC
GACACCTATG TCCCCGGCTA TACCGACGTG AAGGGCTACA GCCTGCTCAA CTTCGACGCG
AGCTGGAACC GGGTGATGGG ATCGGGCTTC GACGTGGCGC TGTTCGTCAA CAACGTCACC
AAGAAGAAGT ACGACTTCCT GCTGATCAAC CTCGACAGCC TGGGCTATAC CAGCCACACG
CCCGGCATGC CGCGCACCTA TGGCGCGACG CTGCGCTACC ATTTCTGA
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| Protein sequence | MKQSLHIASI ATIAFLTMIP VEAQAQEAAR AAPADEAPAA GGIDDIVVTA RRRAERLQDV
PLAVSAVSTA ALERANIQNV AQLSRLVPSL TSVPGQGGSR SLPNFSIRGL SQQELTILAD
QSVSTYIGDI VAARTQGINS ALFDIASVEV LRGPQGTLFG RNTTGGAIII RPARPTDEFE
GRVGVTVGNL DTFNVEGMVN VPLSPNIAIR VAGQRQRDDG FVYDEILQRN VNDTKQEGAR
ASILMHNDDL ESLTVYNYFH ENDGGTASFL QNVRATGSLN GAAVRASRGY RPLEDLLAEQ
QARGIYRIAN GSPIFTKVET HDIANTTSFD LSETIKLKNI VGYRHVKDHI FDDMDGSSNA
LHPQERIDRA KQFSEEFQIL GDTANLNWIA GLYYFRESGR NQGISAVGAV DPGLVEPDNV
AAFPGTAYSN TDTAARNTSY AAFAQGTYRF GGGLSLTAGI RYNRDERQAT IRNRTATACR
FTRDLDNNPA TPETAVPLAQ CELGVKDSFS EVTYNVSLEY KIAADKLVYI AHRHGYRTGG
FGARASTEAG LRRTFRPETV DDVEVGVKAD WRMGDAFLRT NLAGYYAKYK DIQRLLTDPV
AVPPTTVTTN AGRARIYGIE ADILFRPVKM IELTANYAYT NAKFTKFIYP DGTDHSNDPF
ARAPRNVYTL GARLLAPLDE GQGDASVGVS YYHTGDYSGN DTYVPGYTDV KGYSLLNFDA
SWNRVMGSGF DVALFVNNVT KKKYDFLLIN LDSLGYTSHT PGMPRTYGAT LRYHF
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