| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0265 |
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| Symbol | |
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| ID | 5196371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 274215 |
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| End bp | 278969 |
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| Gene Length | 4755 bp |
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| Protein Length | 1584 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640579805 |
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| Product | glutamate synthase (NADH) large subunit |
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| Protein accession | YP_001260774 |
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| Protein GI | 148553192 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.568336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.146722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAGGCC ATGTGATTTT GGAGGGTTCA CTCGGGATAT CATCCCTGTA TAGGCACGGC
CGAAACGCCC GCGCGATCGG GCCCAAGGGA GCAGCATGCC GGATGGCCTA TCCGCACAAT
CAGGGTCTGT ACGATAGCCG CAACGAGCAT GACGCCTGCG GCGTCGGCTT CATCGCCAAC
ATCCGTGGCG AGAAATCCAA CGCGATCGTC CAGCGCGGCC TCGAGATCCT GCTCAAGATC
GACCATCGCG GCGCGGTCGG CGCCGATCCG CTGCTCGGCG ACGGCGCCGG CATCCTGATC
CAGATTCCCG ACGCGCTGCT GCGCGCCTGG GCCGCCGGCA TCGGCGTCGC CCTGCCCGCC
CCCGGCGACT ATGGCGTCGC CATGTGCTTC CTGCCGCGCG ACGCCGCCGC GCGCGACCTG
GCGGTCGGCA ATTTCGAGAA GTTCATCGCC AAGGAAGGCC AGCATCTGAT CGGCTGGCGC
GACGTTCCGG TCGACACCGC CGGCCTCGGC CAGGCGGTGC TCGACGAGAT GCCGGTGATC
CGCCAGGCGA TCATCGGCCG CGGCGGCGAC TGCGCCGACC AGGATGCGTT CGAGCGCAAG
CTGCTCGTCA TCCGCAAGCA GACCCAGAAC CCGCTCGAAG CCCTCGCCCG CAAGCATGAC
CTGCCGGGCC TGACCGATCT CTACATGCCG TCCTTCTCGA CCCGCACCGT GGTCTACAAG
GGGCTGCTGC TCGCGGGCCA GGTCGGCAGC TTCTACAAGG ACCTGTCCGA TCCGCTGACC
ACCTCGGCGA TCGCGCTGGT CCACCAGCGC TTCTCGACCA ACACCTTCCC GAGCTGGAAG
CTGGCGCACC CCTACCGCTT CATCGCCCAC AACGGCGAGA TCAACACGGT GCGCGGCAAC
GTCAACTGGA TGAACGCGCG CCGCCGGACG ATGGAGTCCG ACCTGATCGG CGCCGATCTC
GACAAGATCT GGCCGATCAT CCCGCACGGC CAGTCGGACA CCGCCTGCCT CGACAATGCG
TTGGAGCTGC TCGTCGCCGG CGGCTATTCG CTGGCGCATG CGGTGATGAT GCTGATCCCG
GAAGCCTGGG CCGGCAACCC GCTGATGGAC CCGGCGCGCA AGGCCTTCTA CGAATATCAC
GCCGCGCTGA TGGAGCCGTG GGACGGCCCC GCCGCCGTCG CCTTCACCGA CGGCCGCCAG
ATCGGCGCGA CGCTCGACCG CAACGGCCTG CGCCCCGCCC GCTTCCTCGT CACCGACGAC
GACCATGTGA TCATGGCGTC GGAATCGGGC GTGCTGCCGG TTCCCGAGGA GAAGATCGTC
CGCAAGTGGC GCCTCCAGCC CGGCAAGATG CTGCTGATCG ACATGGAGCA GGGCCGGATC
ATCGAGGACG AGGAGATCAA GGCCAGCCTC GCCGAGGCCG AGCCCTACGC CAAGTGGCTC
GAGGCCAACC AGTACAAGCT CAAGGACCTC GAGGTGCTGG CGACCGACGA CGGGACCGCC
ACCCCCGCTT TGCCCAACGA CCCGCAGGCG CTGCTCGATC GCCAGCAGGC GTTCGGCTAT
TCGCAGGAGG ACATCGCCCG ATTCCTCGAA CCGATGGCCC GCGCCGGCGA GGACCCGATC
GGATCGATGG GCACCGACAC GCCGATCGCC GTGCTCTCGG CCCGGCCGCG CCTGCTCTAC
GACTATTTCA AGCAGAATTT CGCGCAGGTC ACCAACCCGC CGATCGACCC GATCCGCGAG
GAGTTGGTGA TGTCGCTGGT GTCGATGATC GGCCCGCGCC CGAACCTGCT CGGCCGCGAG
GCCGGCACCC ACAAGCGGCT GGAGGTCGAC CAGCCGATCC TCACCAACCG CGACCTGACC
CGCATCCGTT CGGCCGAGGA GCAGCTCGAC GGCGCCTTCC GCACCGAGAC GATCGACATC
ACCTGGGATG CCGCGACCGG GGCCGACGGC CTCGCCATGG CGCTCAAGGA GATGTGCTGG
GCGGCGACCG AGGCGGTGCT CGCCGACAAG AACATCCTGA TCCTGTCCGA CCGCGCCCAG
AGCGCCGACC GGATCGCGAT GCCCGCGCTG CTCGCCACCG CCGCCGTCCA CCATCATCTC
GTCAAGCAGG GGCTGCGCAT GCAGACCGGC CTCGTCGTCG AGACCGGCGA GGCGCGCGAG
GTCCATCATT TCTGCGTGCT CGCGGGCTAT GGCGCGGAGG CGATCAACCC CTGGCTCGCC
TTCGACACGC TGGAGGAGAT CCGCGTCCGC CAGGAGCTGC CGCTGTCGCC CAACGGGGTG
CAGAAGAACT ACATCAAGGC GATCGGCAAG GGCATCCTCA AGGTCATGTC CAAGATGGGC
ATCTCGACCT ATCAGAGCTA TTGCGGCGCG CAGATCTTCG ACGCGATCGG CCTGTCCTCG
GCCTTCGTCG ACAAATATTT CACCGGCACC GCGACGACGA TCGAGGGCAT CGGCCTGGCC
GAGCTCGCCG AGGAGACCGT CCGCCGCCAC GCCGCCGCCT ATGGCGACAA CCCGATCTAC
CGCAACATGC TCGATGTCGG CGGCGTCTAT GGCTACCGCA TCCGCGGCGA GGAGCATGCC
TGGACGCCCG AGAGCGTCTC GGCGCTCCAG CATGCGGTGC GCGGCAACAG CAAGGAGCGC
TACGAGGCGT TCGCCCGCTC GATCAACGAG CAGAACGCCC GGCTGCTGAC GATTCGTGGC
CTGATGACGC TGAAGAAGGC CGACCGGCCG CTGTCGATCG ACGAGGTCGA ACCGGCCTCC
GAGATCGTCA GGCGCTTCGC CACCGGGGCG ATGAGCTTCG GCTCGATCTC GCGCGAGGCG
CACACCACGC TGGCGATGGC GATGAACCGC ATCGGCGGCC GTTCGAACAC CGGCGAGGGC
GGCGAGGAAG CCGATCGCTT CAAGCCGCTG CCCAACGGCG ACTCGATGCG CTCGGCGATC
AAGCAGGTCG CCTCGGGCCG GTTCGGCGTC ACCGCCGAAT ATCTGGTCAA CGCCGACGAC
ATCCAGATCA AGATGGCGCA GGGCGCGAAG CCCGGCGAAG GCGGCCAGCT GCCCGGCGAC
AAGGTCGACA AGAACATCGC CCGCGTCCGC CATTCGACGC CCGGCGTCGG CCTGATCTCG
CCGCCGCCGC ACCACGACAT CTATTCGATC GAGGACCTGG CGCAGCTCAT CCACGACCTC
AAGAACGTCA ACACCGGCGC CCGCATCTCG GTGAAGCTGG TGTCGGAGGT CGGCGTCGGC
ACGGTCGCGG CCGGCGTCTC CAAGGCGCGC GCCGACCATG TCACCATCTC CGGCTATGAG
GGCGGCACCG GCGCCTCCCC GCTCACCTCG CTCACCCATG CCGGCAGCCC GTGGGAGATC
GGCCTCGCCG AGACCCAGCA GACGCTGCTG CTCAACGGCC TCAGGAGCCG CATCGCGGTG
CAGGTCGACG GCGGGCTGCG CACCGGCCGC GACGTCGCGA TCGGCGCGCT GCTGGGGGCC
GACGAGTTCG GCTTCGCCAC CGCGCCGCTG ATCGCCGCCG GCTGCATCAT GATGCGCAAA
TGCCATCTCA ACACCTGCCC GGTCGGCGTC GCCACCCAGG ACCCGGTGCT GCGCGCGCGC
TTCACCGGCC AGCCCGAGCA TGTGATCAAC TATTTCTTCT TCGTCGCGGA GGAGCTGCGC
CAGATCATGG CGGAGATGGG CTTCCGCACG ATAGAGGAGA TGGTCGGCCG GGTCGACCGG
ATCGACATGC GTCCGGCGCT CGACCATTGG AAGGCGCACG GCGTCGACCT CGGCCGCCTG
CTCCACCAGG CGCCGCCGGC GATGGGCAAC ACGCTCCACC ACTCGCAGTT CCAGGACCAC
GGCCTCGACG CCGCGCTCGA CAACCACCTG ATCGCCGCCG CGATGCCGGC GCTCGAACAG
GGCGAGCCGG TGGTGATCGA GCGGCCCGTC GCCAACGTCA ACCGCACCGT CGGCGCGATG
CTGTCGGGCG AGGTTGCGAA GCGCCACGGC CATGAGGGCC TGCCGGAGAA CAGCATCACC
GTCCGCCTGA CCGGCGTCGC GGGGCAGAGC TTCGGCGCCT TCCTGGCGCA CGGCGTCACC
CTGGAGCTGA CCGGCGACGG CAACGACTAT GTCGGCAAGG GCCTGTCGGG CGGCCGCGTG
ATCGTCCGCC AGCCGGCCGG GGTCGACCGC GATCCGCTGG AGAACATCAT CGTCGGCAAC
ACCGTGCTCT ACGGCGCGAT CGCGGGCGAG GCCTATTTCC AGGGCGTCGC GGGCGAGCGC
TTCGCGGTCC GCAACTCGGG CGCGATCGCG GTGGTCGAGG GCACCGGCGA CCATGGCTGC
GAATATATGA CCGGCGGCGT GGTCGCCGTG CTCGGCCGCA CCGGGCGCAA CTTCGCGGCG
GGCATGTCGG GCGGCATCGC CTATGTCCAC GACGCCGACG GGCTGTTCCG CCAGCGCTGC
AACCTGGCGA TGGTCGACGT CGAGCCGATC GATCCCGCCG CCGACGCCGA CGTCGAGGAG
GGCCGCCCGC ACCAGCGCGC CGCCAGCGTC CACGACTATG GCATGGGCGA CATGCTCCGC
CATGACGCGG CGCGGCTGCG CATCCTGCTC GAACGGCATC ATCTCCACAC CGGCAGCGAT
CAGGCCGCCG CGTTGCTGGA GGATTGGGAC ACCACGCTGT CGCGCTTCGT GAAGGTCATG
CCGCGCGACT ATCGGCGGGC GTTGCAGCAG CTTGAGGCCG AGCGCCTCGC CGCCGCCAAC
GTCGCCGCCG AATGA
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| Protein sequence | MQGHVILEGS LGISSLYRHG RNARAIGPKG AACRMAYPHN QGLYDSRNEH DACGVGFIAN
IRGEKSNAIV QRGLEILLKI DHRGAVGADP LLGDGAGILI QIPDALLRAW AAGIGVALPA
PGDYGVAMCF LPRDAAARDL AVGNFEKFIA KEGQHLIGWR DVPVDTAGLG QAVLDEMPVI
RQAIIGRGGD CADQDAFERK LLVIRKQTQN PLEALARKHD LPGLTDLYMP SFSTRTVVYK
GLLLAGQVGS FYKDLSDPLT TSAIALVHQR FSTNTFPSWK LAHPYRFIAH NGEINTVRGN
VNWMNARRRT MESDLIGADL DKIWPIIPHG QSDTACLDNA LELLVAGGYS LAHAVMMLIP
EAWAGNPLMD PARKAFYEYH AALMEPWDGP AAVAFTDGRQ IGATLDRNGL RPARFLVTDD
DHVIMASESG VLPVPEEKIV RKWRLQPGKM LLIDMEQGRI IEDEEIKASL AEAEPYAKWL
EANQYKLKDL EVLATDDGTA TPALPNDPQA LLDRQQAFGY SQEDIARFLE PMARAGEDPI
GSMGTDTPIA VLSARPRLLY DYFKQNFAQV TNPPIDPIRE ELVMSLVSMI GPRPNLLGRE
AGTHKRLEVD QPILTNRDLT RIRSAEEQLD GAFRTETIDI TWDAATGADG LAMALKEMCW
AATEAVLADK NILILSDRAQ SADRIAMPAL LATAAVHHHL VKQGLRMQTG LVVETGEARE
VHHFCVLAGY GAEAINPWLA FDTLEEIRVR QELPLSPNGV QKNYIKAIGK GILKVMSKMG
ISTYQSYCGA QIFDAIGLSS AFVDKYFTGT ATTIEGIGLA ELAEETVRRH AAAYGDNPIY
RNMLDVGGVY GYRIRGEEHA WTPESVSALQ HAVRGNSKER YEAFARSINE QNARLLTIRG
LMTLKKADRP LSIDEVEPAS EIVRRFATGA MSFGSISREA HTTLAMAMNR IGGRSNTGEG
GEEADRFKPL PNGDSMRSAI KQVASGRFGV TAEYLVNADD IQIKMAQGAK PGEGGQLPGD
KVDKNIARVR HSTPGVGLIS PPPHHDIYSI EDLAQLIHDL KNVNTGARIS VKLVSEVGVG
TVAAGVSKAR ADHVTISGYE GGTGASPLTS LTHAGSPWEI GLAETQQTLL LNGLRSRIAV
QVDGGLRTGR DVAIGALLGA DEFGFATAPL IAAGCIMMRK CHLNTCPVGV ATQDPVLRAR
FTGQPEHVIN YFFFVAEELR QIMAEMGFRT IEEMVGRVDR IDMRPALDHW KAHGVDLGRL
LHQAPPAMGN TLHHSQFQDH GLDAALDNHL IAAAMPALEQ GEPVVIERPV ANVNRTVGAM
LSGEVAKRHG HEGLPENSIT VRLTGVAGQS FGAFLAHGVT LELTGDGNDY VGKGLSGGRV
IVRQPAGVDR DPLENIIVGN TVLYGAIAGE AYFQGVAGER FAVRNSGAIA VVEGTGDHGC
EYMTGGVVAV LGRTGRNFAA GMSGGIAYVH DADGLFRQRC NLAMVDVEPI DPAADADVEE
GRPHQRAASV HDYGMGDMLR HDAARLRILL ERHHLHTGSD QAAALLEDWD TTLSRFVKVM
PRDYRRALQQ LEAERLAAAN VAAE
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