Gene Swit_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0253 
Symbol 
ID5196907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp261084 
End bp261815 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content70% 
IMG OID640579793 
ProductMazG family protein 
Protein accessionYP_001260762 
Protein GI148553180 
COG category[R] General function prediction only 
COG ID[COG3956] Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain 
TIGRFAM ID[TIGR00444] MazG family protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.17737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.20735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGG AACTTCGCGA CATCATGGCG CGCCTGCGCG ACCCGGAAAC CGGCTGCCCC 
TGGGACGTCG AGCAGGATTT CCGCACCATC GCCCCCTATA CGATCGAGGA GGCCTATGAG
GTCGCCGACG CGATCGAGCG CGACGACATG GCGGCGCTGC GCGACGAGCT GGGCGACCTC
CAGCTCCAGG TCGTGTTCCA CGCCCGCATG GCCGAGGAGG CGGGCGCGTT CGACCTGAAG
GACGTGCTCG ATTCAATCAG CGCGAAGATG ATCCGCCGCC ATCCCCATGT GTTCGGCGAC
GGCGCGAGCC CCGGCTGGGA GGAGATCAAG GCCGCCGAGC GCGCGGGCGC GTCGGAGGAC
GGCAGCGCGC TGGCCGGGGT CGCGTCCGCC CTGCCCGCGC TGCTCCGCGC CGAAAAGCTC
CAGAAGCGCG CCGCGCGCAC CGGCTTCGAC TGGCCCGATC CCGACGGCGC GCGCGACAAG
GTCGCCGAGG AGATCGACGA GGTCCGCACG GCGGCGACCG ATGCCGACCG CTTCGAGGAG
ATGGGCGACC TGCTGTTCGC GGTGGTCAAC TGGTCGCGCA AGCTGGGCAT CGACCCCGAG
GCGGCGCTGC GCGCGGCCAA CCTGAAGTTC GAGAAACGCT TCCGCGCGAT GGAGGATATC
GCCGGGGAGG CCTTCAAGGG CCTGTCGCTC GAAGACAAGG AAGCGCTCTG GGTGCGGGTG
AAACGATCCT GA
 
Protein sequence
MLEELRDIMA RLRDPETGCP WDVEQDFRTI APYTIEEAYE VADAIERDDM AALRDELGDL 
QLQVVFHARM AEEAGAFDLK DVLDSISAKM IRRHPHVFGD GASPGWEEIK AAERAGASED
GSALAGVASA LPALLRAEKL QKRAARTGFD WPDPDGARDK VAEEIDEVRT AATDADRFEE
MGDLLFAVVN WSRKLGIDPE AALRAANLKF EKRFRAMEDI AGEAFKGLSL EDKEALWVRV
KRS