Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0244 |
Symbol | ispDF |
ID | 5197538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 249389 |
End bp | 250537 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640579784 |
Product | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein |
Protein accession | YP_001260753 |
Protein GI | 148553171 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.281494 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGGA AGCCCAGCAT CGCCGCCTTG ATCGTCGCCG CCGGACAGGG CGTCCGCAGC GGCGGCGGCG TGCCCAAGCA ATATCGCCGG ATCGGCGGCA AGGCGGTGCT CGCCCATGCC GTCGACGCGC TGGCGCGCCA TCCGGCGATC GGCAGCGTCC AGGTCGTGAT CGGCGCGGGT CAGGAGGATC TCCATGCCGA GGCGGTCGGC GGACGCACCC TGCCCCCGCC CGTCACCGGC GGCGCGACCC GGCGCGATTC GGTGATCGCC GGGCTGGCGG CGGTCGACGC CGACATCGTC CTGATCCACG ACGCCGCCCG CCCCTTCCTG CCCGCCGCGG TGATCGACCG GCTGATCGCC GCGCTCGACG GCAGCGACGG CGCGGTTCCC GCGCTCGCGG TCGCCGACAC GCTGGCGAAG GGCGACGCCC TGCTCGGCGA CGCCGTGCCG CGCGACGGGC TGCACCGCGT CCAGACGCCG CAGGCCTTCC GCCGCGCCGA CATCCTCGCC GCGCACCGCG CCTGGGACCC GGCGCGCGAA GCGACCGACG ACGCGCAGGT CGCGCGCGCC CACGGCCTGT CGGTCGCGAT CGTCGAGGGC GACCGCAGCC TGGAGAAGCT CACTTTTGCC GCCGATTTCG AGGCCGCCGA GGAAAGGATG GCGATGATCA GCCGCACCGC GATGGGCTTC GACGTCCACG GCTTCACCGC CGGCGACGGC GTCCAGCTCG GCGGCGTCCG CATCGCCCAT GACCGCGCCC TCGCCGGGCA CAGCGACGCC GACGTCGCGC TCCACGCGCT GACCGACGCG CTGCTCGGCA CGATCGCGGC GGGCGATATC GGCAGCCATT TCCCGCCCAG CGACCAACGC TGGAAAGGCG CCGATTCGGC GATGTTCCTG GCCCATGCCC GCGACCTCGT CGCGGCGGCG GGCGGGATCG TCGACTTCGT CGACCTGACC ATCATCTGCG AAGCGCCCAA GGTCGGCCCG CACCGCGCGG CGATCCGCGA CCGGATCGCC GCCCTGCTCG GCCTGACGGC GGGCCAGGTC AGCGTCAAGG CGACCACCAC CGAGCGGCTC GGCTTCACCG GCCGGCGCGA GGGGATCGCG GCGCAGGCGG TTGCAACGGT GCGCGTGCCG TCCATATAG
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Protein sequence | MTGKPSIAAL IVAAGQGVRS GGGVPKQYRR IGGKAVLAHA VDALARHPAI GSVQVVIGAG QEDLHAEAVG GRTLPPPVTG GATRRDSVIA GLAAVDADIV LIHDAARPFL PAAVIDRLIA ALDGSDGAVP ALAVADTLAK GDALLGDAVP RDGLHRVQTP QAFRRADILA AHRAWDPARE ATDDAQVARA HGLSVAIVEG DRSLEKLTFA ADFEAAEERM AMISRTAMGF DVHGFTAGDG VQLGGVRIAH DRALAGHSDA DVALHALTDA LLGTIAAGDI GSHFPPSDQR WKGADSAMFL AHARDLVAAA GGIVDFVDLT IICEAPKVGP HRAAIRDRIA ALLGLTAGQV SVKATTTERL GFTGRREGIA AQAVATVRVP SI
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