| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0238 |
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| Symbol | |
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| ID | 5196927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 244453 |
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| End bp | 246132 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579778 |
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| Product | putative ABC transporter ATP-binding protein |
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| Protein accession | YP_001260747 |
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| Protein GI | 148553165 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.331867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTGC AATATAGTTT CGTGATGAAG GGTCTGACCA AGACCTTCCC CGGCGCCAAC
AAGCCGCTGT TCAACAACAT CCACCTGCAG TTCCTGCCGG GGACGAAGAT CGCGATCATC
GGCGTCAACG GCGCCGGCAA GTCGACCCTG ATGAAGGTCA TGGCCGGCAT GGACACCGAT
TATTCGGGCG AGGCCTGGGC CGCCGAGGGC GTCAGCGTCG GCTATCTGCC GCAGGAGCCG
CAGCTCGATC CGGACAAGAC GGTCAAGCAG AACGTCATGG ACGGCGTCCG CGAGGTCGCG
GACATGATCG ACCGCTTCAA CGCGATCTCG GCCGAGATGG GCGATCCCAA GGACGACACC
GATTTCGACG CGCTGATGGA GGAGATGGGC GTCCTCCAGG AGAAGATCGA CGCGGCCGAC
GGCTGGACGC TCGACAACCA GCTCGAGATC GCGATGGAAG CGCTGCGCTG CCCGCCGGGC
GACCTGCCGG TCACCGGCCT GTCGGGCGGC GAGAAGCGCC GCGTCGCCCT GTGCCGCCTG
CTGCTCGAAA AGCCCGACAT CCTGCTGCTC GACGAGCCGA CCAACCATCT CGACGCGGAG
AGCGTCGCCT GGCTCGAACA GCATCTGGTC GATTATTCGG GCAACGTCAT CCTCGTCACC
CACGATCGCT ACTTCCTCGA CAATGTCGTG GGCTGGGTGC TCGAGCTCGA TCGCGGCCGG
GGTATTCCCT ATGAGGGCAA TTATTCGTCG TGGCTCGACG CCAAGGCGAA GCGCATGGAG
CAGGAGGAGC GCGAGGACGC CGGCCGCCAG AAGGCGATCA AGGAGGAGCT GGAGTGGATC
CGGCAGAGCC CGAAGGCGCG CCAGACCAAG TCCAAGGCGC GTATCCGCGC GTTCGACGAA
CTGGTCGAGA AGCAGAACAA TCGCGCGCCC GGCAAGGCCC AGATCGTCAT CCAGACCCCC
GAGCGCCTCG GCGGCAAGGT GATCGAGGCC AAGGGGCTGA CCAAGTCCTA TGGCGACAAG
AAGCTGTTCG AGGGGCTCGA CTTCACGCTG CCGCCGGGCG GCATCGTCGG CGTGATCGGG
CCGAACGGCG CGGGCAAGAC CACGCTGTTC CGGCTGATCA CCGGCCAGGA GACCCCCGAC
GCCGGTTCGA TCGACATCGG CCCGACCGTC AAGCTCGGCT TCGTCGACCA GAGCCGCGAC
GCGCTCGATT CGAACAAGAA CGTCTGGGAG GAAGTGTCGG AGGGTCATGA CATCATGACC
GTCGGCAAGT TCGAGATGTC GACCCGCGCC TATGTCGGCG CGTTCAACTT CAAGGGCCCC
GACCAGCAGA AGAAGGTCGG CCAGCTCTCG GGCGGCGAAC GCAACCGCGT CCACATGGCG
AAGATGCTCC GCAAGGGCGG CAACGTGCTG CTGCTCGACG AGCCGACCAA CGACCTCGAC
GTCGAGACGC TGCGCGCGCT CGAGGACGCG CTGGAGAATT TCGCGGGCTG CGCGGTGGTG
ATCAGCCACG ACCGCTTCTT CCTCGATCGC CTCGCCACCC ACATCCTCGC CTTCGAGGGC
GACGGCCATG TCGAATGGTT CGAAGGCAAT TTCGAAAGCT ATGAGGAAGA CAAGCGCCGC
CGCCTCGGCG ACGCCGCCGA CCGGGCCAGC GCCGGGGCGT ACAAGAAGCT GACGCGTTAA
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| Protein sequence | MAVQYSFVMK GLTKTFPGAN KPLFNNIHLQ FLPGTKIAII GVNGAGKSTL MKVMAGMDTD
YSGEAWAAEG VSVGYLPQEP QLDPDKTVKQ NVMDGVREVA DMIDRFNAIS AEMGDPKDDT
DFDALMEEMG VLQEKIDAAD GWTLDNQLEI AMEALRCPPG DLPVTGLSGG EKRRVALCRL
LLEKPDILLL DEPTNHLDAE SVAWLEQHLV DYSGNVILVT HDRYFLDNVV GWVLELDRGR
GIPYEGNYSS WLDAKAKRME QEEREDAGRQ KAIKEELEWI RQSPKARQTK SKARIRAFDE
LVEKQNNRAP GKAQIVIQTP ERLGGKVIEA KGLTKSYGDK KLFEGLDFTL PPGGIVGVIG
PNGAGKTTLF RLITGQETPD AGSIDIGPTV KLGFVDQSRD ALDSNKNVWE EVSEGHDIMT
VGKFEMSTRA YVGAFNFKGP DQQKKVGQLS GGERNRVHMA KMLRKGGNVL LLDEPTNDLD
VETLRALEDA LENFAGCAVV ISHDRFFLDR LATHILAFEG DGHVEWFEGN FESYEEDKRR
RLGDAADRAS AGAYKKLTR
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