Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0235 |
Symbol | |
ID | 5197355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 241656 |
End bp | 242342 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640579775 |
Product | hypothetical protein |
Protein accession | YP_001260744 |
Protein GI | 148553162 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.422765 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGGCGG CGCGGGCGGC GGACTGGTCG CCCTCGCTCT CCGCGACGCT GACCAGCGAC GAGCGCCGCC GCGGGCTGAG CTGGAGCGAC GGCCGTCCGG CGGCGAGCGC GCGCCTGTCG CTGCAACCTG CCGAGGGCCT GTCGGTCTCG GTCGCGGGCA CGACGCTGCG CCACGGCGCG CGGCACGATG GCGCCGCGAT CGGGATCGAC AGCGCCCTCG TCTACACGCA GGACTTCGGC GCGATCCGCG CCGACGCCCA GATCAGCCAC CACGCCTTCC CCGGCCATGG CGGCGCGAAC TATGTCGAGC TGGGCGGCGG CGCGGGCACG ACGATCGGCC CCGTCCAGTT CGACCTGTTC GGCCTCTACG CCCCGAAGCA GGACGCGATC GGCGGCGACA ATCTCTACCT CGCCGCCGCC GCCTCGGTCG CGATCGTCGG GACGCCGGTC ACGGTCGGCG CGCAGGTCGG CCGGTCGAGC GGCACGTCCG ACGATCCCGT CCGCTCCGCC CGCCTCCGCC CGCACGGCCG CTACACCGAC GCGGCGCTGC GCGTCGACTA TGTCGCCGGG CCCTTCACGA TCGGCGTCGA CCTGACCGAC AGCTGGCACG GCCGCCGCGT GGCCAGCGGC CCGATCGCGG CCGACGCCGG ACGGCGGGTT TCGGCGCGGA TCGGGGTCAG CCTCTAA
|
Protein sequence | MQAARAADWS PSLSATLTSD ERRRGLSWSD GRPAASARLS LQPAEGLSVS VAGTTLRHGA RHDGAAIGID SALVYTQDFG AIRADAQISH HAFPGHGGAN YVELGGGAGT TIGPVQFDLF GLYAPKQDAI GGDNLYLAAA ASVAIVGTPV TVGAQVGRSS GTSDDPVRSA RLRPHGRYTD AALRVDYVAG PFTIGVDLTD SWHGRRVASG PIAADAGRRV SARIGVSL
|
| |