Gene Swit_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0235 
Symbol 
ID5197355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp241656 
End bp242342 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content75% 
IMG OID640579775 
Producthypothetical protein 
Protein accessionYP_001260744 
Protein GI148553162 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.422765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGG CGCGGGCGGC GGACTGGTCG CCCTCGCTCT CCGCGACGCT GACCAGCGAC 
GAGCGCCGCC GCGGGCTGAG CTGGAGCGAC GGCCGTCCGG CGGCGAGCGC GCGCCTGTCG
CTGCAACCTG CCGAGGGCCT GTCGGTCTCG GTCGCGGGCA CGACGCTGCG CCACGGCGCG
CGGCACGATG GCGCCGCGAT CGGGATCGAC AGCGCCCTCG TCTACACGCA GGACTTCGGC
GCGATCCGCG CCGACGCCCA GATCAGCCAC CACGCCTTCC CCGGCCATGG CGGCGCGAAC
TATGTCGAGC TGGGCGGCGG CGCGGGCACG ACGATCGGCC CCGTCCAGTT CGACCTGTTC
GGCCTCTACG CCCCGAAGCA GGACGCGATC GGCGGCGACA ATCTCTACCT CGCCGCCGCC
GCCTCGGTCG CGATCGTCGG GACGCCGGTC ACGGTCGGCG CGCAGGTCGG CCGGTCGAGC
GGCACGTCCG ACGATCCCGT CCGCTCCGCC CGCCTCCGCC CGCACGGCCG CTACACCGAC
GCGGCGCTGC GCGTCGACTA TGTCGCCGGG CCCTTCACGA TCGGCGTCGA CCTGACCGAC
AGCTGGCACG GCCGCCGCGT GGCCAGCGGC CCGATCGCGG CCGACGCCGG ACGGCGGGTT
TCGGCGCGGA TCGGGGTCAG CCTCTAA
 
Protein sequence
MQAARAADWS PSLSATLTSD ERRRGLSWSD GRPAASARLS LQPAEGLSVS VAGTTLRHGA 
RHDGAAIGID SALVYTQDFG AIRADAQISH HAFPGHGGAN YVELGGGAGT TIGPVQFDLF
GLYAPKQDAI GGDNLYLAAA ASVAIVGTPV TVGAQVGRSS GTSDDPVRSA RLRPHGRYTD
AALRVDYVAG PFTIGVDLTD SWHGRRVASG PIAADAGRRV SARIGVSL