| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0228 |
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| Symbol | |
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| ID | 5196747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 232344 |
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| End bp | 233996 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579768 |
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| Product | acetolactate synthase |
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| Protein accession | YP_001260737 |
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| Protein GI | 148553155 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.027454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGA AGGCATCCGA TCTCTTCATC CAATGTCTGG AAGAGGAGGG CTGCGAATAT
ATCTTCGGCG TTCCCGGCGA GGAAAACCTC GACATGCTCG ACAGCCTCTC GCGGTCGACG
AAGATCAAGC TGATCCTGAC CCGCCACGAA CAGGGCGCCG GCTTCATGGC CGCGACCTAT
GGCCGCCACA CCGGCAAGAC CGGCGTCTGC ATGGCGACGC TCGGGCCGGG CGCGACCAAT
TTCGTGACCG CCGCCGCCTA TGCGCAGCTC GGCGGCATGC CGATCCTGAT GGTCACCGGC
CAGAAGCCGA TCAAGAAGTC GAAGCAGGGC CGCTTCCAGA TTCTCGAAGT CGTCGAGATG
ATGAAGCCGA TCACCAAATT CACCCATCAG CTCGCCTCGG CCGACAACAT CCCGAGCCGC
ATCCGCGAGG CCTATCGCCT CGCCGAGGAG GAGAAGCCGG GCGCGACCCA TATCGAGTTC
CCCGAAGACG TCGCCGACGA GCACACCGAC TCGAAGCCGC TCAAGCGCTC GCTCGCCCGC
CGGCCCGAGG CCGAGGACAA GGCGGTCCGC GCCGCCGTGA AGATGATCGA GGACGCGAAG
TCGCCGATCC TGGTGATCGG CGCCGGCGGC AACCGCAAGC AGACCGGCCG GATGCTGCTC
CAGTTCATCG AGAAGACCGG CATCCCCTTC GTCACCACCC AGCTCGGCAA GGGCGTGATC
GACGAATGCC ACCCGAAGTT CCTGGGCTGC GCCGCGCTGT CGGCGGGCGA CTTCGTCCAC
CGCTCGATCG AGCATGCCGA CCTGATCATC AACGTCGGCC ATGACGTGAT CGAGAAGCCG
CCCTTCTTCA TGCGCAACGG CGGCACCCCG GTGATCCACG TCAGCTCGAA GACCGCCGAG
GTCGACCCGG TCTATTTCCC GCAGGTCGAG GTGATCGGCG ACATCGCCAA CGCCATCTGG
AAGATGCAGA AGGACATCGT CCCGTCGGGC CGCTGGAATT TCGACTTCAT GATGAAGGCC
CGCAAGGCCG AGGTCGCCCA TACCGAGACG CTCGAAGACG ATGAGCGCTT CCCGATCTTC
CCGCCGCACC TGGTGCGCGA GATCCGTCGC GCCATGCCGG CCGACGGCAT CATCTGCCTG
GACAACGGCG TCTACAAGAT CTGGTTCGCG CGCAACTATC CGGCGCGCCA GCAGAACACC
GTGCTGCTCG ACAACGCGCT CGCCACGATG GGCGCGGGCC TGCCCTCGGC GATGGCGTCG
GCGATGGTCT ATCCGGACCG CAAGGTGATG GCGATCTGCG GCGACGGCGG CTTCATGATG
AACAGCCAGG AGATGGAGAC CGCGGTCCGC CTCGGCCTCA ACATCACCGT GCTGATCCTC
AACGACAGCT CCTACGGCAT GATCCGCTGG AAGCAGGCGA ACATGGGCTT CAAGGACTGG
GGCCTGACCT ACGGCAATCC CGACTTCGTC AAATATGCCG AAAGCTACGG CGCCAAGGGC
CACCGCGTCG AAAGCGCGGC GCATCTGACC AAGCTGATCA AGGAATGCCT CGACACGCCC
GGCGTCCACC TGATCGATTG CCCGGTCGAC TATTCCGAGA ACGACCAGAT CCTCAACAAG
GACATCAAGA CGCTCAGCAA GGAAATATCT TAA
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| Protein sequence | MATKASDLFI QCLEEEGCEY IFGVPGEENL DMLDSLSRST KIKLILTRHE QGAGFMAATY
GRHTGKTGVC MATLGPGATN FVTAAAYAQL GGMPILMVTG QKPIKKSKQG RFQILEVVEM
MKPITKFTHQ LASADNIPSR IREAYRLAEE EKPGATHIEF PEDVADEHTD SKPLKRSLAR
RPEAEDKAVR AAVKMIEDAK SPILVIGAGG NRKQTGRMLL QFIEKTGIPF VTTQLGKGVI
DECHPKFLGC AALSAGDFVH RSIEHADLII NVGHDVIEKP PFFMRNGGTP VIHVSSKTAE
VDPVYFPQVE VIGDIANAIW KMQKDIVPSG RWNFDFMMKA RKAEVAHTET LEDDERFPIF
PPHLVREIRR AMPADGIICL DNGVYKIWFA RNYPARQQNT VLLDNALATM GAGLPSAMAS
AMVYPDRKVM AICGDGGFMM NSQEMETAVR LGLNITVLIL NDSSYGMIRW KQANMGFKDW
GLTYGNPDFV KYAESYGAKG HRVESAAHLT KLIKECLDTP GVHLIDCPVD YSENDQILNK
DIKTLSKEIS
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