| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0227 |
|---|
| Symbol | |
|---|
| ID | 5200844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 230812 |
|---|
| End bp | 232248 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640579767 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001260736 |
|---|
| Protein GI | 148553154 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.436059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCA AAGACACCTA TCCCCTCTAT CTCGCCAACG AGGCGCAGCA GCCGAACACC
GACCTGAAGG TGACCGACAA GTTCACCGGC GAGGTCGCGA CCCGCGTCGC GCTGGCCGAT
GCGAAGACGA TCGACGCCGC GATCGGATGG GCGGTGAAGG CCGCCGAGCC GATGGCGAAG
ATGGCGAGCT ACGAACGGCA GGCCGTCCTC CAGCATTGCG TCGACCGCTT CGTCGAGCGC
AAGGACGAGC TCGCCTACGC GCTGTGCGTC GAGGCCGGCA AGCCGATCAA CGACTCGCGC
GGCGAGGTCG GCCGCCTGAT CGACACCTTC CGCATCGCCG CCGAGGAATC GGTGCGCATG
ACCGGCGAGG TCCAGCCGCT CGACATCTCG CCGCGCGCCC GCGGCTATCA GGGGATCTGG
AAGCGGGTGC CGATCGGCCC CTGCTCGTTC ATCTCGCCGT TCAACTTCCC GCTCAACCTC
GCCGCGCACA AGATCGCCCC GGCCATCGCG GTCGGCTGTC CGTTCGTGAT GAAGCCGGCG
AGCCGCACCC CGCTCGGCGC GATCATCATG GGCGAGGTGC TGGCCGAGAC CAACCTGCCC
AAGGGCGCCT TCTCGATCCT GCCGGCGGCG CGCGACGGCG CCGACCTGTT CACGGTCGAC
GACCGGCTCA AGCTGCTGTC CTTCACCGGA TCGCCCGACG TGGGCTGGGA CCTCAAGGCC
CGCGCCGGCA AGAAGAAGAT CGTGCTCGAA CTCGGCGGCA ACGCCGCGGT GGTGATCGAT
GCCGACGCCG ACCTCGACGA CGCGGTCGAG CGTACCGTGT TCGGCGCCTT TTACCAGTCG
GGCCAGTCGT GCATCGGCGT CCAGCGCATC CTGGTCCACG ACGCGGTCTA CGACGCGTTC
CGCGACAAGC TGGTCGCCAA GACCAAGACG CTGATCGCCG GCAACCCGCA TGACGAGAAG
ACCTTCGTCG GCCCGATGAT CGACGTGAAG GAGGCCGAGC GCCTCGACGG CTGGATCCAG
GAGGCGACCG CCAAGGGCGC GACCCTGCTG TGCGGCGGCA GGCGCGAGGG CGCGATGCTC
GAGGCGACGC TGCTCGAGAA GGTCGATCCC GACACCAAGC TCAACCGCGA GGAGGCGTTC
GGCCCCGCCG CCTTCCTGAT CCGCTTCAGC GACTGGCACG AGGCGCTCAG GATCGTGAAC
GATTCGAAGT TCGGCCTCCA GGCCGGCATC TTCACCCGCG ACATCTTCAA GATCCTCGAC
GCCTGGGACG ATCTCGACGT GGGCGGCGTC GTCGTCAACG ACGTGCCGAG CTACCGGGTC
GACAACATGC CCTATGGCGG CGTCAAGGAC TCGGGCCTCG GCCGCGAGGG CATCCGTTTC
GCGATGGAGG ACATGACCGA GATCCGCAAT CTCGTCATCC GGCGGCGAAG CGCTTGA
|
|---|
| Protein sequence | MKLKDTYPLY LANEAQQPNT DLKVTDKFTG EVATRVALAD AKTIDAAIGW AVKAAEPMAK
MASYERQAVL QHCVDRFVER KDELAYALCV EAGKPINDSR GEVGRLIDTF RIAAEESVRM
TGEVQPLDIS PRARGYQGIW KRVPIGPCSF ISPFNFPLNL AAHKIAPAIA VGCPFVMKPA
SRTPLGAIIM GEVLAETNLP KGAFSILPAA RDGADLFTVD DRLKLLSFTG SPDVGWDLKA
RAGKKKIVLE LGGNAAVVID ADADLDDAVE RTVFGAFYQS GQSCIGVQRI LVHDAVYDAF
RDKLVAKTKT LIAGNPHDEK TFVGPMIDVK EAERLDGWIQ EATAKGATLL CGGRREGAML
EATLLEKVDP DTKLNREEAF GPAAFLIRFS DWHEALRIVN DSKFGLQAGI FTRDIFKILD
AWDDLDVGGV VVNDVPSYRV DNMPYGGVKD SGLGREGIRF AMEDMTEIRN LVIRRRSA
|
|---|
| |