| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0218 |
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| Symbol | |
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| ID | 5197417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 216147 |
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| End bp | 218351 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579758 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001260727 |
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| Protein GI | 148553145 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGCGGC CGGAGGCTCC CCCTAAGCAC GGGCGGATGG CCCGCGCCCA TGTCCTCCTG
CTCAACCCCG CCCTCGGGCC GCTCGACTAT CGCGCCGACC GCGAGCATGT CGTCGAGCCG
GGCAGCATCG TGCTCGCGCC GCTAGGCCCC CGGCAGATGG TCGGCGTGGT GTGGGAGGAG
GAGACGCTGC CCTCGGCCGA CCAGGTCGGC GACAACCGGC TCCGCCCGCT GCTCGACGTC
TACGACGTCC CGCCGCTCGC CGCCCCGCTG CGCCGGCTGA TCGAATGGAC CTCCGACTAT
TATCTGGCGC CGCCCGCCGC GGTGCTGCGG ATGGCGCTGC CCTCCTCCAG CGCGCTCGAC
GGCGCGCGGA CGATCGTCGA ATATCGCGCG ACCGGCGAGC GGCCCGGCCG GATGACCCCG
CAGCGCGAGC AGGCGCTCGA CCGGATCGGC CAGCGCCAGG GCCTGATCCG CGAGCTGGCG
ACGATCGCCG ACGTGTCCGA GGGCGTGATC CGCGGCCTCG TCAAGTCGGG CGCGATCGAG
GCGGTGACGG TGTCGATCGA CACGCCGTGG GACGCCCCCG ATCCCGACCA TAAGGCGGTC
GAGCTGTCGG ACGAGCAGCA GCTCGCCGCC GGCATGCTGG CGGAGGCGGT CGCGGCGAAG
CGCTTCCAGC CCTTCCTGCT CGACGGCGTC ACCGGATCGG GCAAGACCGA GGTCTATTTC
GAAGCGGTCG CCGAGGCGCT GCGCGCCGGC CGGCAGACGC TGGTGCTGCT GCCCGAGATC
GCGCTGACCG AACCCTTTCT CAAGCGCTTC GAGGCGCGCT TCGGCCATCT CCCCGTCGCT
TGGCACAGCG AGCTGCGCCA GTCGCAGCGG CGGCGCGCCT GGCGCGGCAT CGTCCATGGC
GAGGCGAAGG TCGTCGTCGG GGCGCGATCG GCGCTGTTCC TGCCCTATCG CGACCTCGGC
CTGATCATCG TCGACGAGGC GCACGAGACC AGCTTCAAGC AGGAGGACGG CGTCCTCTAC
CATGCCCGCG ACGTCGCGGT GATGCGCGCC AAGCTGGAGG AGATCCCGAT CGTGCTCGCC
TCGGCGACCC CGGCGATCGA GACGCGCCAG CAGGCGACGA TCGGCCGCTA CACCGAATTG
AAGCTCACCG CGCGCCACGG CGCCGCCGAG ATGCCGGAGA TCGAGGCGAT CGACCTGCTC
GCCGATCCGC CGCCGCGCGG GCGCTGGATC GCGCCGACGC TGGTGCGCGC GCTGGCCGAC
CGGCTCGAGA AGAAGGAGCA GAGCCTGCTC TTCCTCAACC GGCGCGGCTA TGCGCCGCTG
ACGCTGTGCC GGACCTGCGG CCACCGCTTC CAATGCCCGA ACTGCACCGC CTGGATGGTC
GAGCACCGGC TGCTCGGCCG GCTGCAATGC CACCATTGCG GGCACAGCAT GGCGCCGCCC
GCCGAATGCC CGGAGTGCAA GGACGAGGAC AGCCTGGTCG CCTGCGGCCC CGGCGTCGAG
CGGATCGCCG ACGAGGTGGC GGCGCTGTTC CCCGACGCGC GGGTGGCGAT CGCCACCTCC
GACACGCTCT CCACCCCGGC CCGCGCCGCC GAGTTCGTCG AACGGATGGA GGCGGGCGAC
ATCGACGTGG TGGTCGGCAC CCAGCTCGTC ACCAAGGGCT ATCATTTCCC CGAGCTGACC
CTCGTCGGGG TGATCGACGC CGATCTCGGC CTGTCGGGCG GCGACCTGCG CGCGGCCGAG
CGCAGCTTCC AGCAGATCGC CCAGGTCGCC GGGCGCGCCG GACGCGGCGC CAAGCCCGGC
CATGTCTATA TCCAGACCCA TGCGCCCAAG GCCCCGGTGA TCCAGGCGCT GCTCTCGGGC
GACGCGCAGA GCTTCTACAC GGCCGAGACC GAGGCGCGGA AGATCGCCGA GGCGCCGCCC
TTCGGCCGCT ACGCCGCGAT CATCATCTCC GCCGAGAAGC TGGAGGAGGC GGCGACCACC
GCGCGGCTGA TCGGCCGGAC GGCGCCCGCC ATCGACGGCA TGCACGTCTA CGGCCCCGCC
CCCGCCCCGC TCGCCATGCT GCGCGGCCGC CACCGGCAGC GCCTGCTGGT CCACGCCCGC
CGCTCGCTCG ACGTCCAGCA GGTGATCCGC GACTGGCTCG GCCCGCTGCA ATGGCCGCGC
GGCGTCCGCG TCGCGGTCGA TGTCGATCCG TATAGCTTCT TGTAG
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| Protein sequence | MRRPEAPPKH GRMARAHVLL LNPALGPLDY RADREHVVEP GSIVLAPLGP RQMVGVVWEE
ETLPSADQVG DNRLRPLLDV YDVPPLAAPL RRLIEWTSDY YLAPPAAVLR MALPSSSALD
GARTIVEYRA TGERPGRMTP QREQALDRIG QRQGLIRELA TIADVSEGVI RGLVKSGAIE
AVTVSIDTPW DAPDPDHKAV ELSDEQQLAA GMLAEAVAAK RFQPFLLDGV TGSGKTEVYF
EAVAEALRAG RQTLVLLPEI ALTEPFLKRF EARFGHLPVA WHSELRQSQR RRAWRGIVHG
EAKVVVGARS ALFLPYRDLG LIIVDEAHET SFKQEDGVLY HARDVAVMRA KLEEIPIVLA
SATPAIETRQ QATIGRYTEL KLTARHGAAE MPEIEAIDLL ADPPPRGRWI APTLVRALAD
RLEKKEQSLL FLNRRGYAPL TLCRTCGHRF QCPNCTAWMV EHRLLGRLQC HHCGHSMAPP
AECPECKDED SLVACGPGVE RIADEVAALF PDARVAIATS DTLSTPARAA EFVERMEAGD
IDVVVGTQLV TKGYHFPELT LVGVIDADLG LSGGDLRAAE RSFQQIAQVA GRAGRGAKPG
HVYIQTHAPK APVIQALLSG DAQSFYTAET EARKIAEAPP FGRYAAIIIS AEKLEEAATT
ARLIGRTAPA IDGMHVYGPA PAPLAMLRGR HRQRLLVHAR RSLDVQQVIR DWLGPLQWPR
GVRVAVDVDP YSFL
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