| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0216 |
|---|
| Symbol | |
|---|
| ID | 5196417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 214890 |
|---|
| End bp | 215171 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640579756 |
|---|
| Product | flagellar biosynthetic protein FliQ |
|---|
| Protein accession | YP_001260725 |
|---|
| Protein GI | 148553143 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1987] Flagellar biosynthesis pathway, component FliQ |
|---|
| TIGRFAM ID | [TIGR01402] flagellar biosynthetic protein FliQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.397416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAGCG CCGGCAGCCC CGACTATTTC ATCGGCATCG CCCAGCAGGC GATGTGGATC
CTCGCGCTCG CCTCGGCGCC GATCCTGATC CCGGCGCTGG TCGCGGGGAT CATCCTGGGC
ATGATCCAGG CGGCGACCTC GATCAACGAG CAGACCTTGA GCTTCGTCCC TAAGCTGATC
GTCGTCGGCA TCGCGCTGGC ACTGTTCGGC GGGGCGATCC TGATGCTGCT CGCCGACTTC
ACGCGCGAGA TATTCGCCCG CATCCCGGAC ATGCTCCGAT GA
|
|---|
| Protein sequence | MDSAGSPDYF IGIAQQAMWI LALASAPILI PALVAGIILG MIQAATSINE QTLSFVPKLI
VVGIALALFG GAILMLLADF TREIFARIPD MLR
|
|---|
| |