| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0203 |
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| Symbol | |
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| ID | 5200148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 205257 |
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| End bp | 205913 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579743 |
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| Product | endonuclease III / DNA-(apurinic or apyrimidinic site) lyase |
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| Protein accession | YP_001260712 |
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| Protein GI | 148553130 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.419558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAGG CGGACATCTT CGAATTCTAC CGGCGGCTCG CGGAGGACGA TCCCGCGCCG
GAGACCGAGC TCAACTATGT GAACCCCTAT ACGCTGCTGG TCGCGGTGGC GCTGTCGGCG
CAGGCGACCG ACGTCGGGGT GAACAAGGCG ACCGGCCCGC TGTTCGCCAG GGTCACCACG
CCGCAGCAGA TGCTGGAACT GGGCGAGGAA GGGCTGAAGC GGCATATCAA GACGATCGGC
CTGTTCAACA CCAAGGCGAA GAACGTCATC GCCGCCGCCC ACATCCTGGT CGACAAATAT
GGCGGCGAGG TGCCGCAAAG CCGCGAGGCG CTGGAGGAAC TGCCCGGCGT CGGCCGCAAG
ACCGCCAATG TCGTGATGAA CACCGCCTTC GGCGCCGAGA CGATCGCGGT CGACACCCAT
ATCTTCCGCG TCGCCAACCG CACCGGCCTG GCGCCGGGCA AGAACGTCCT CCAGGTCGAG
CTGAAGCTGG AGAAGGTGAC GCCCAAGCCC TTCCTGCAGG GGGCGCATCA CTGGCTGATC
CTGCACGGCC GCTACATCTG CAAGGCGCGC AAGCCCGAAT GCTGGCGCTG CCCGGTCGCC
GACCTGTGCG CGTTCAAGCC CAAGACCCCC GCGCCGCCCC CGCCCAGGGC GGCCTGA
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| Protein sequence | MKKADIFEFY RRLAEDDPAP ETELNYVNPY TLLVAVALSA QATDVGVNKA TGPLFARVTT
PQQMLELGEE GLKRHIKTIG LFNTKAKNVI AAAHILVDKY GGEVPQSREA LEELPGVGRK
TANVVMNTAF GAETIAVDTH IFRVANRTGL APGKNVLQVE LKLEKVTPKP FLQGAHHWLI
LHGRYICKAR KPECWRCPVA DLCAFKPKTP APPPPRAA
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