Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0197 |
Symbol | |
ID | 5196916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 191049 |
End bp | 195293 |
Gene Length | 4245 bp |
Protein Length | 1414 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640579736 |
Product | hypothetical protein |
Protein accession | YP_001260706 |
Protein GI | 148553124 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.356041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCA AACGCCAGTC GGTTGCGGCC TCTGCATCGC CACCAGTCTT TTTCGAGGCG ATCCGGACCC GCGCGGCACA GCGTTGGGAT CAGCTTGAGG CTGACCCCGA ACTGGCCGGT CCGTGGCATC AGCTATTCAA GCAGGTGCAG AGCCCGCGCC ATATCCTCTC TGAACTGCTG CAGAACGCAG ATGATGCCGG CGCCAGCGAA GCGCATGTGT CCATCGAGGG CGAGCGTTTC GTGTTCGAGC ACAACGGAGA GGATTTCATC GAAGCGCATT TCGCATCGAT CTGCCGGTTC GGCTACTCGA ACAAGCGCGC GCTCCACACG ATCGGGTTTC GCGGGATCGG CTTCAAGAGC ACGTTCAGCC TCGGTGATCG GGTCGAGCTT TACACCCCCT CGCTCGCGGT CGCGTTCGAG AAAGCGCGCT TCACCGAACC TCATTGGATC GGCGGCGAGC GCCTAACCGT GGGGAGCACG CGCGTCGAGG TCGCCATCGC CAGCGACCTG CGCCGGCGGG AGGTCGAGAA GAATCTCGAC GAATGGCTAA AAAGCCCAAC TTCGCTGCTG TTTTTCAGGA ATATCCGCAA GCTGCGGATC GGCGAGAAGA CCGTGCATTG GCAAAGCATG GGTGCTGGCC CTGTTCCCGA CAGCGAATGG ATGGCGCTTG ATGACAAGGA CGAGAATCCC TTTCTGCTCA TGCGGTCGGG CGAGGAAGCC TTCCCCTCGG ATGCACTCGA GGAAATTCGC CAGGAACGCA TGCTGGGCGC CGAGGACGGT GGCGAGTTTC CGCCCTGCCG GATCGAGATC GTGCTGGGCG CGAAGGGACG ACTCTATGTG GTCCTGCCAA CCGGCGTCGA GACCCCGCTT CCCTTCGCTT GCAACGCACC CTTCATCCAG GATCCCGCGC GTCTCAAGAT CAAGGATCCC TCGATCTCGC CCACCAACCG CTGGCTGCTC GAATGTGCCG GCACGCTCGC GGCCGAGGCG ATGGCGGGAT GGCTACGGGA CGCGAAGACC GGGCTTGAGG ATCGCGCGGG GGCCTATGGG CTCATGCCCG ACGTCAACCG CGAGGCGAAC GATCTTGAAG GGGCGTGCGG CGCGATCGTC GAGCTGGCGT TTGATGAGGC GATTGGTGAG GCGCCGATCC TGCTCACCGA TGAGGGGAAG CTCGTCGGCG GCAAGGCGGC CATCATCATG CCGTCCGCCA TCTTCGACAT CTGGCCGGCC GAACAGGCGA TGGCCTTGCT CGACGAGGAT GCGCGGCCGG CACTCTCGCG GCATGTATCG CGCGCGAACC GCACCAAGCT CCAGAACTGG AACTTGGTCG AGGCGTTCAG CAAGGAGAAC CTGCTCGAGC GCCTGGCCGA GGTTCACCTG CCGCGCCCGG CGACCTGGCG CCACCTACTC AACTTGTGGA CCTACATCGC GCCTGAGGTG ACGGGCTATG GCTGCACTGA TCCCAAGGCG CTGCGGATCG TGCCGGTGCA GGGCCAGGAC GTGCTTTTCG CGGCATCGGA GGTGGTACGC CTCGGCGAGA AGAAGTTGCT CCAGTCGGAC GAGGATTGGG CGTTCCTTTC CGAACATCTG GTCGTCGTCA ACCAGAACTG GACGCGCTTC CTCGCCGACC AGCGCCGCGA CAAGCCGGAC GCGAAAGCCA CCCGCGAGGA CCCCGTCCAG GGCGCGTTCG ATGTGCTGGA GGAGATCGGT CTCGACGCGA CCAGCGACGT GAGCGCCGTG ATCGAGCGGA TCGCCGAGGC CTATTTCGGA GCGGGCCAAC CCAAATTGGC CGATTGTGTG CGGATCGCCC AGATCGCCGC CAAGCTCGGT GCGACGATCG GCGCTTCGTT CCGTTACGCC GCGGCCGACC GCAAGCTGCG GCGAACCAGT CAGACCGTTC TGTTCGACGA GGACGGCACG CTCGATGCGC TTCTGCCCAA GACGATCCGC GAGACGCAGC TCCTGCATCC CGATTATGTC GCGCGCTTTT CGTCGTGCTC GCGCGAAGAA TGGCTCCGCT GGGTCGGCTC GGGTCGTTCG GGACTTCACA CGTTCGTGCC CTTGGCCTCC ACGCGGTTCA GCGTGTACGG GCGCTCGCGC ATCGCGGCCG AGGCCAAGGC GCGGGGGCAG AATGGGCCGC TCCACTATCC TTACGTGACC GACAATTTCG TTGTCGAGGA TTGGGACTTC GCCGCCGATT ATTGGAAGCA CTGGCAGGCG GTATCAGGCT CCGACCCCAG CATCTGGGCG AAGGTCGCGG GAAACATCCT CGCGCAGCGT GAAAGTTATT GGTCGCGGGC GTCGAGCGCC CGGTTGTTGC AGGTCGCGAC CACCGGATCG ACACGCGCGG TCAGCTGGGA AACCCTGGTG GCGGGCTGGG TCCTGAAGCT CCGGGACAAG CCCTGTCTTC CCGACACGCG CGATGTCGCG CAGCTGCCCG CTGACCTGCT GCGGCGAACG CCGGAGACCG AATCCTTCAT CGATGTCGAG CCTTTCGTGC ATGGGCTCCT CGACCGGGAA GCGACGCGGC CGCTGCTCGA CATTCTCGGA GTCCGGCGCA CACCGAGCGG TCCTGGCCAG CTGCTCAAGC GCCTGAGGGC ACTGGCGGGA TCGGCTCGCG CGCCGGCGCA TGAAGTCGAG AAATGGTATC GCCGCCTCGA CACGATGCTG GAGAGCTGCT CGACGGCGGA CGCCGTGAGC GTCAAGGATG CCTTCAAGAC CGAGCGGCTG ATCCTCGCGC AGGACGGCTC GTGGGTGACC GCGGGGAGCG TCTTCATCCA CGGCGATGAA GAGGATGTGC CGGGGGCAGC GCTCATTCGC GCGTCGGTCG CCGATCTCAC CCTCTGGCAC CGTGTCGACG TCGCCGACCG TCCGTCGGCC GATCTGGCGC TTCAGTGGCT GGGGTCGCTC GCCTCCGGTT CATCGCTTTC GCCAGACGAC GCGCGCCGCG TGCGTGCGCT CCTCGTCAAA TATCCCGTCC GCATTTGGCA GGAATGCGGG CACTGGATGA ACCTGCTCGG CGAATGGGCG GCGATCGACA CGCTCGATTA TGCGCTCAGC ATGCAGGGTC TGGTGCGGTG GAGTCATCTC CACGATTGGG TGAAGCGCAA GACCGCCGAC TTGCAGCGCT TGTCCGGTGA AATCGCGCGC GAGGCACCCT TTACCGGGCT GGCAGCCCTG TCAGACAAGA TCGAGGAACG GTTTGACCAG CCCTCCTTCC CGGCCGGGTT CGAGGACAAG CGGGCGTGGC TCAGCGCCTT TGGCAGGCAG CTACAGCGGA TCGAGCTTGA CGATCCGGCC GAAACCGAGC GTGTTCGCGC GGTCGCCGTC GATATTGCCG ATACCGCCTG GGTGACTGCA CCACGGCTGG AAGTGATCCC CTATCTGGAT GGCACGCCTG CCGGTACTGG GCGGCCTGCC GATCTCGTCT GGCTCGATCG CACGCTGTTC GTGACGCCGC TCTCCAAGGC CAAGCTTGCC AAACGCGTGC CGGAAGAGAT CGGCAAAAGC CTCTCCCCCG ATGTTCGCTC GGCACTGGCT TATGCGTTCG AACGGTCCGC GGACGATATC CGGGACTATC TGGAAGAGAA TTTCAGGCTC GCGCCGGAGG ACAGCACTTA CGAACCGGCT GACACACCGT CGGCTGATGC AGCGCCCGAG TCCTCCACCA ACAGCCCACC GGCGGAAGAC TCAAGGCCGG ATGACGAAAC CATAGAACCC GAAGACGACG CGGTATTGCT CAATGCCGAT GATGCGGATG CGGATGCGCC GGCATCCTCG GCCGAACCAT CTGACGACGC GCCAAGCGAT GATCTGATGG ACGAGCCCGC GTCCCCATCC CGGCCACGGG CGGCGCCAAA GCCTCGCCAG CCCGGTGTCA TGGCACGTTT TGCGCTTGCG CAGGGGTTTA AGGCCGATGG CGAGGATCGC TTCTTCCATT CGGATGGAAG CTGGATCGCT CGCGCCAACG GCGCCAAATT CCCCTGGGAG CGCCGCTCGG CGAGCGGCGA GGTGCTGCGT CATTATTATC CGAAAGAGCA TTGCCTGGAG CGAGAGCCGC TCCAGGTGGA AGCCGATGTT TGGGGCCTGC TCGACCAGAA AGCTGACATC TACTCCTTCA TTCTCGTCAA TCCCGAGGGT GAGCCCGTCG AAATGACGGG AAGCCGCCTA TGCGCCCTGC GCGATGGCGG CGAAATTACC ATTCACCCCG CAACGTACAG GCTGGTTTAT GACCTCGACG AATAA
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Protein sequence | MSAKRQSVAA SASPPVFFEA IRTRAAQRWD QLEADPELAG PWHQLFKQVQ SPRHILSELL QNADDAGASE AHVSIEGERF VFEHNGEDFI EAHFASICRF GYSNKRALHT IGFRGIGFKS TFSLGDRVEL YTPSLAVAFE KARFTEPHWI GGERLTVGST RVEVAIASDL RRREVEKNLD EWLKSPTSLL FFRNIRKLRI GEKTVHWQSM GAGPVPDSEW MALDDKDENP FLLMRSGEEA FPSDALEEIR QERMLGAEDG GEFPPCRIEI VLGAKGRLYV VLPTGVETPL PFACNAPFIQ DPARLKIKDP SISPTNRWLL ECAGTLAAEA MAGWLRDAKT GLEDRAGAYG LMPDVNREAN DLEGACGAIV ELAFDEAIGE APILLTDEGK LVGGKAAIIM PSAIFDIWPA EQAMALLDED ARPALSRHVS RANRTKLQNW NLVEAFSKEN LLERLAEVHL PRPATWRHLL NLWTYIAPEV TGYGCTDPKA LRIVPVQGQD VLFAASEVVR LGEKKLLQSD EDWAFLSEHL VVVNQNWTRF LADQRRDKPD AKATREDPVQ GAFDVLEEIG LDATSDVSAV IERIAEAYFG AGQPKLADCV RIAQIAAKLG ATIGASFRYA AADRKLRRTS QTVLFDEDGT LDALLPKTIR ETQLLHPDYV ARFSSCSREE WLRWVGSGRS GLHTFVPLAS TRFSVYGRSR IAAEAKARGQ NGPLHYPYVT DNFVVEDWDF AADYWKHWQA VSGSDPSIWA KVAGNILAQR ESYWSRASSA RLLQVATTGS TRAVSWETLV AGWVLKLRDK PCLPDTRDVA QLPADLLRRT PETESFIDVE PFVHGLLDRE ATRPLLDILG VRRTPSGPGQ LLKRLRALAG SARAPAHEVE KWYRRLDTML ESCSTADAVS VKDAFKTERL ILAQDGSWVT AGSVFIHGDE EDVPGAALIR ASVADLTLWH RVDVADRPSA DLALQWLGSL ASGSSLSPDD ARRVRALLVK YPVRIWQECG HWMNLLGEWA AIDTLDYALS MQGLVRWSHL HDWVKRKTAD LQRLSGEIAR EAPFTGLAAL SDKIEERFDQ PSFPAGFEDK RAWLSAFGRQ LQRIELDDPA ETERVRAVAV DIADTAWVTA PRLEVIPYLD GTPAGTGRPA DLVWLDRTLF VTPLSKAKLA KRVPEEIGKS LSPDVRSALA YAFERSADDI RDYLEENFRL APEDSTYEPA DTPSADAAPE SSTNSPPAED SRPDDETIEP EDDAVLLNAD DADADAPASS AEPSDDAPSD DLMDEPASPS RPRAAPKPRQ PGVMARFALA QGFKADGEDR FFHSDGSWIA RANGAKFPWE RRSASGEVLR HYYPKEHCLE REPLQVEADV WGLLDQKADI YSFILVNPEG EPVEMTGSRL CALRDGGEIT IHPATYRLVY DLDE
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