Gene Swit_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0190 
Symbol 
ID5200071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp180004 
End bp180912 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID640579729 
Producthypothetical protein 
Protein accessionYP_001260699 
Protein GI148553117 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0261596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.413386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCCGC AAGACGAAGA CGGCGCACTC TCGCAGACCG CGCACCTGCT CGATGAGATC 
GCGCTCTATG GCTATCGCCC GTTCGAGGAC GAGCCCGACC CGCGACCGTT GCCGGAGCCG
CGACAGGCTG CTGGGGCGAT CGCCGACATG TTCGACGCGA TGGTCGCCAC ACTGCAGGAC
ACGCGTCTCG AGCCCGATCT CGAGGACTTG CTCTGGGCGT TCGGCAATGT CTTTCACCGT
GCCGCCGAGC GTATCGAGCG TCAGCTCGAC GACAACGAGG TCGCGCAGCG CCGCTCGGTC
CGCGCGCAGG ACGGCAGCGA GGTAAAATCG GTCGAACTCG AGACGCTGCT GCGCGAAGGC
TCCACCTTGA TCGAACGCCG CGACGCCATG GAATTTTTCC GCGAAGCCTC AGCCGAGCAG
TTCCGGCTGC ATCTGGGCCG CGCCTGGACG CCGCGCAGCG GCTCGCTGGT CAACCGCAAG
GCGCTGACCG CCGCGATGGT CGACAGCCGC GAGTTCATCG CCGCGAGGAA GCGCGCGGAC
AACCAGGTCC TGATCCCCGC GGGCACCCGG ATCGCGATCA CCGGAGGCGC CGACTATCAG
GATCATCGCC GCATCTGGGA TGCCCTGGAC AAAGTGCATG CCAAGCATCC CGACATGATC
CTGCTGCACG GTGGCACACC AACCGGCGCC GAGCATATCG CTGAGTGCTG GGCGCGCAGC
CGCAAGGTCG CGACGATCGC TTTCCGGCCT GACTGGAACC GCCATCACAA GGCCGCCCCC
TTCAAGCGCA ATGACGCGCT GCTTGCCGAA TTGCCGGTGG GCGTGCTCGC GTTCCCGGGC
TCTGGGATCA ACGCCAATCT TGCCGACAAG GCGCACAAGA TGGGCATTCC GGTCTGGAGG
TTCGACTGA
 
Protein sequence
MDPQDEDGAL SQTAHLLDEI ALYGYRPFED EPDPRPLPEP RQAAGAIADM FDAMVATLQD 
TRLEPDLEDL LWAFGNVFHR AAERIERQLD DNEVAQRRSV RAQDGSEVKS VELETLLREG
STLIERRDAM EFFREASAEQ FRLHLGRAWT PRSGSLVNRK ALTAAMVDSR EFIAARKRAD
NQVLIPAGTR IAITGGADYQ DHRRIWDALD KVHAKHPDMI LLHGGTPTGA EHIAECWARS
RKVATIAFRP DWNRHHKAAP FKRNDALLAE LPVGVLAFPG SGINANLADK AHKMGIPVWR
FD