Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0190 |
Symbol | |
ID | 5200071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 180004 |
End bp | 180912 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579729 |
Product | hypothetical protein |
Protein accession | YP_001260699 |
Protein GI | 148553117 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0261596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.413386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCGC AAGACGAAGA CGGCGCACTC TCGCAGACCG CGCACCTGCT CGATGAGATC GCGCTCTATG GCTATCGCCC GTTCGAGGAC GAGCCCGACC CGCGACCGTT GCCGGAGCCG CGACAGGCTG CTGGGGCGAT CGCCGACATG TTCGACGCGA TGGTCGCCAC ACTGCAGGAC ACGCGTCTCG AGCCCGATCT CGAGGACTTG CTCTGGGCGT TCGGCAATGT CTTTCACCGT GCCGCCGAGC GTATCGAGCG TCAGCTCGAC GACAACGAGG TCGCGCAGCG CCGCTCGGTC CGCGCGCAGG ACGGCAGCGA GGTAAAATCG GTCGAACTCG AGACGCTGCT GCGCGAAGGC TCCACCTTGA TCGAACGCCG CGACGCCATG GAATTTTTCC GCGAAGCCTC AGCCGAGCAG TTCCGGCTGC ATCTGGGCCG CGCCTGGACG CCGCGCAGCG GCTCGCTGGT CAACCGCAAG GCGCTGACCG CCGCGATGGT CGACAGCCGC GAGTTCATCG CCGCGAGGAA GCGCGCGGAC AACCAGGTCC TGATCCCCGC GGGCACCCGG ATCGCGATCA CCGGAGGCGC CGACTATCAG GATCATCGCC GCATCTGGGA TGCCCTGGAC AAAGTGCATG CCAAGCATCC CGACATGATC CTGCTGCACG GTGGCACACC AACCGGCGCC GAGCATATCG CTGAGTGCTG GGCGCGCAGC CGCAAGGTCG CGACGATCGC TTTCCGGCCT GACTGGAACC GCCATCACAA GGCCGCCCCC TTCAAGCGCA ATGACGCGCT GCTTGCCGAA TTGCCGGTGG GCGTGCTCGC GTTCCCGGGC TCTGGGATCA ACGCCAATCT TGCCGACAAG GCGCACAAGA TGGGCATTCC GGTCTGGAGG TTCGACTGA
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Protein sequence | MDPQDEDGAL SQTAHLLDEI ALYGYRPFED EPDPRPLPEP RQAAGAIADM FDAMVATLQD TRLEPDLEDL LWAFGNVFHR AAERIERQLD DNEVAQRRSV RAQDGSEVKS VELETLLREG STLIERRDAM EFFREASAEQ FRLHLGRAWT PRSGSLVNRK ALTAAMVDSR EFIAARKRAD NQVLIPAGTR IAITGGADYQ DHRRIWDALD KVHAKHPDMI LLHGGTPTGA EHIAECWARS RKVATIAFRP DWNRHHKAAP FKRNDALLAE LPVGVLAFPG SGINANLADK AHKMGIPVWR FD
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