Gene Swit_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0185 
Symbol 
ID5199913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp175047 
End bp175598 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID640579724 
Producthypothetical protein 
Protein accessionYP_001260694 
Protein GI148553112 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.575618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGT CCGGCTTCGC CTCTGCCGCT CATGGCCGCA ACGGCTTGCG GCAACGCTTT 
TTTCCCCTGC GGCTTCGCCG CATTCCGCGC GGAGCAAAAA AGCGCACCCG CCGCCGTCCT
CCGCGGATGC TCCGGGCCTT CGGCTGCGTC CGCGGCAGCC CCGGTCCTTC CCAAGCCATC
GAGGCCGCAC TCGGGCGGGC TCGAGGATCA CAAGGAGACT TCATCATGGC CACCATCGGT
AACTTCAAGA AGACCGCCAA CGACGAATTC GTCGGTGAGA TCGTCACCCT CTCCGTCCAG
GCCAAGGGCG TGCGGATCGT TCCGGACAGC AACCCGGCCA GCGAGAACGC ACCCTCCCAT
CGGGTGATGG TGGGTCGCGC GGAAATCGGC GCGGCGTGGA CCAAGCGCTC GAACGAAGGC
CGCGATTATC TCGGCCTCAA GCTCGACGAT CCGAGCTTCA CCGCCCCGAT CTACGCCAAC
CTCTTCGACG ACGAGGACGG CGAGACCTTC AACCTCATCT GGTCGCGTCC CTCCCGGCGC
AATGGCGACT GA
 
Protein sequence
MTASGFASAA HGRNGLRQRF FPLRLRRIPR GAKKRTRRRP PRMLRAFGCV RGSPGPSQAI 
EAALGRARGS QGDFIMATIG NFKKTANDEF VGEIVTLSVQ AKGVRIVPDS NPASENAPSH
RVMVGRAEIG AAWTKRSNEG RDYLGLKLDD PSFTAPIYAN LFDDEDGETF NLIWSRPSRR
NGD