Gene Swit_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0183 
Symbol 
ID5199911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp173517 
End bp174275 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID640579722 
Producthypothetical protein 
Protein accessionYP_001260692 
Protein GI148553110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.8786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG GCATCTCGCC CATCGCGCCC AGGCCGCGGC GCGGTTGCGC CGGGCGATCG 
GGATCGGCCA GCCACTGTGG CCACGGCCCC ACCGCCACGC CCATCGCCTG GCCGCGATGC
TCTACATTCA CGATCGCGCG GCGGACGGCG TTTCGCTGCG CGACATCGCG GCCGAGCTGC
TCGCGCCGAT GCCCGACGAC TGGCGCTCGA GCTCCGAGCG CTCGGACCTG CGGCGCCTCG
CCGACGCGGC CGCCGTCATG GTCGAGGGCG GTTATCGCGC CCTGCTCGCG CCGCGCGGCA
ACCCCCAAAG CTGACCGGCT CATTGCGCCA AGGATTCGGC GGCGATCCGC GCCCAGACTG
TGGTCGCAAC CGGCACCCCT CTATTCCGGC CACCCGCTTA CCCCTTCCTC CGCCGATCAT
GTCCCCGGTC GCGCTGTTCG TCCCCTCGGC GGCGCGGCCA CTTCATTCAT CGCAAGGACG
ATCATGGCCG ACATCATCAA GGACACGCGC TACCTGCGTA CCAAGGAGGC CGCGCATTAT
GTCGGCCTTT CCGCGCGGAC GCTCGAAAAG CACCGCACCT ATGGCACCGG GCCTGCCTAC
CGGAAGATCG GCGGGCGCGT CATCTATTCG ATCGAGGACC TCCGCGCATG GTGCGATCGC
GGCGCCTGCG CATCGACCTC CGATCCCAAC AACGGCAAGG TCCTGCCCGC CATCCGCCAG
CCTGACGGCG GCGCGGACGA CGAGGACGGG CGGGCGTGA
 
Protein sequence
MPIGISPIAP RPRRGCAGRS GSASHCGHGP TATPIAWPRC STFTIARRTA FRCATSRPSC 
SRRCPTTGAR APSARTCGAS PTRPPSWSRA VIAPCSRRAA TPKADRLIAP RIRRRSAPRL
WSQPAPLYSG HPLTPSSADH VPGRAVRPLG GAATSFIART IMADIIKDTR YLRTKEAAHY
VGLSARTLEK HRTYGTGPAY RKIGGRVIYS IEDLRAWCDR GACASTSDPN NGKVLPAIRQ
PDGGADDEDG RA