Gene Swit_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0174 
Symbol 
ID5200325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp165032 
End bp165517 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content58% 
IMG OID640579713 
Producthypothetical protein 
Protein accessionYP_001260683 
Protein GI148553101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.582709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.551801 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGGGC AGGACCAGTT TATCGAGGAT GTCTATGCGC GCGAGGTGGT CATGGCTCGC 
GTCGGGCACC TCATCCGGAG AAAGCAACAG GAAATTGAAC GCATCACGCG CATCGTGCGT
GCGGCCGCTT CGTTCGAGGG TGTGGCTGCT CCGGTCTCCG GCAAAATCCT GAAGATCGTG
CTTATTGGAC CCTATGCCAG GCGCACCTGG TACGAGGACA AGGCCTCGCT CTATTTTTCA
GACTACGAGT TCTGGGTCAT CGTCAATCAT ACGCTCTATG CTGACGACAC GCGGTGGTGT
CGTGCGAAGG CGATTATCGC TCGTGAACTG GGAAACCGCT GCGCGGTGTC TCTGTCTGTG
TTTTCCAAGG CGGACATCAA ATCCGCCAAA GCCAGCAAAG ACCATTTTAT TCTGGACCGG
CTCGAGGCGG GCATCGTGCT GTTCAAGGCC TCGCGCGACG CGCCGCTGCC GCACCCCATC
ACATGA
 
Protein sequence
MHGQDQFIED VYAREVVMAR VGHLIRRKQQ EIERITRIVR AAASFEGVAA PVSGKILKIV 
LIGPYARRTW YEDKASLYFS DYEFWVIVNH TLYADDTRWC RAKAIIAREL GNRCAVSLSV
FSKADIKSAK ASKDHFILDR LEAGIVLFKA SRDAPLPHPI T