Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0174 |
Symbol | |
ID | 5200325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 165032 |
End bp | 165517 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640579713 |
Product | hypothetical protein |
Protein accession | YP_001260683 |
Protein GI | 148553101 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.582709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.551801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACGGGC AGGACCAGTT TATCGAGGAT GTCTATGCGC GCGAGGTGGT CATGGCTCGC GTCGGGCACC TCATCCGGAG AAAGCAACAG GAAATTGAAC GCATCACGCG CATCGTGCGT GCGGCCGCTT CGTTCGAGGG TGTGGCTGCT CCGGTCTCCG GCAAAATCCT GAAGATCGTG CTTATTGGAC CCTATGCCAG GCGCACCTGG TACGAGGACA AGGCCTCGCT CTATTTTTCA GACTACGAGT TCTGGGTCAT CGTCAATCAT ACGCTCTATG CTGACGACAC GCGGTGGTGT CGTGCGAAGG CGATTATCGC TCGTGAACTG GGAAACCGCT GCGCGGTGTC TCTGTCTGTG TTTTCCAAGG CGGACATCAA ATCCGCCAAA GCCAGCAAAG ACCATTTTAT TCTGGACCGG CTCGAGGCGG GCATCGTGCT GTTCAAGGCC TCGCGCGACG CGCCGCTGCC GCACCCCATC ACATGA
|
Protein sequence | MHGQDQFIED VYAREVVMAR VGHLIRRKQQ EIERITRIVR AAASFEGVAA PVSGKILKIV LIGPYARRTW YEDKASLYFS DYEFWVIVNH TLYADDTRWC RAKAIIAREL GNRCAVSLSV FSKADIKSAK ASKDHFILDR LEAGIVLFKA SRDAPLPHPI T
|
| |