| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0143 |
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| Symbol | |
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| ID | 5198794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 139682 |
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| End bp | 141115 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579682 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001260652 |
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| Protein GI | 148553070 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.712292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCATGA GCGGCAGCGC GATGGCGCGG ATCGTCGGCA TCCAGACCGT GATCCAGTTC
GTCATCGACT TTTCCGCCAG CCTGATCGTC GCCCGCCTGC TGTCGCCGCA CGAGCTGGGC
GCCTTCTCGA TCGCGCTGGC GGCGGTGATG ATCGCGCAGA CGCTGCGCAG CGCGGGGATC
AACATGTTCC TCGTCTCCGC GCCCGAGCTC GACCAGACCC GCATCCGCAC CGCGCTCGGC
CTGGCGATGA TCGCCAGCTT CGGCTTCGCG CTGCTGATCT TCGCCGCCGC GCCGCTGATC
GCCGCCTTCT ACCGCGCGGC GGTGATCGCC GACGTGCTGC GGATCGTCGC CTTCACCTAT
CTGCTCGCGC CCTTCCAGGT GCTCGCCCAT GGCCTGCTCA ACCGCGCGCT GCGGTTCAAG
GCGATCATGG CCGCCACCCT GGCCGGGGCC GCCACCAGCG GGGGAACCGC CGTCGCCCTC
GCCTTCCTCG GCTGGGGGAC GCTGTCGATG GCCTATGCGA CGCTGGCCGG CGGGATCGTC
AGCCTGGGCG TGATGCTCGC CAGCCGCCCG GCCGGCTTCG TCTTCCGCCC CGCCCTCGTC
CATTGGCGGT CGATCTCCTC CTTCACCGGC TGGGTGCTCG GCAGCACGCT GCTCAACCAG
ATCGGCCCGC GCCTCAACGA ACTGTTCGTC GGCCGCTCGC TCGGCATCGC CCCCGCCGCC
TTCCTCGACC GGGCGGAGAT GCTGCCGCGG ATGCTGTGGA ACTATGCCGC GCCGCCGGTG
CTCAGCATCC TCGCCCCGCT GGTCGCGCAC GAGATGCGCC GCGGCGTCGA CGCGCGGACC
ACCCTGTTGC TCCGCATGCG GCTGTTCGGC TGCATCTTCT CCCCGATCAT GATCGGCATC
GCCACCCAGT CGGCGCCGAT CCTGATCGGC CTCTATGGCT GGCAGTGGCA GGCCTCGATC
GCGCCCGCGC CATGGGTGTG CGTGGCGGCG GCGATCACCG GGCAGTTCGT CGTGCTCGGC
GCCTCGCTCT CGGGCCTCGG CCATGCCCGC CCGCTGTTCC TGCTCAGCAT CTGCGAACAG
GGCGCGCGCG TCGTCATGCT GGCGATGCTG AGCCGGACCG ACATCGTCCT GGTCGCGATC
GGCACGGTCG GCGTCTCGCT GGTCTATGCG GCGGCGGCGA TCCGGCTCGG CGCGCGGCTG
AAGCTGTTCA CCGTGCGCGA GGTGCTGGCG AGCCTGATGC CGTCGATCGC GATCTGCGCG
GTGGTGGCGG CGGCCGGCAT CGCCATCGAC ATGGCGCGCG GCGGCGGCAT TCCGGCGCAC
CCGATCCCGG CGGTGATCGA GGCGGCCGCG ATCCTGGCGG TGGTGTGGAT CGCCGCGCTG
TTCGTCTTCC AGCGGTCGGT GATCACCGCG CTGTGGAAGC TGGTGCGGCA TTGA
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| Protein sequence | MSMSGSAMAR IVGIQTVIQF VIDFSASLIV ARLLSPHELG AFSIALAAVM IAQTLRSAGI
NMFLVSAPEL DQTRIRTALG LAMIASFGFA LLIFAAAPLI AAFYRAAVIA DVLRIVAFTY
LLAPFQVLAH GLLNRALRFK AIMAATLAGA ATSGGTAVAL AFLGWGTLSM AYATLAGGIV
SLGVMLASRP AGFVFRPALV HWRSISSFTG WVLGSTLLNQ IGPRLNELFV GRSLGIAPAA
FLDRAEMLPR MLWNYAAPPV LSILAPLVAH EMRRGVDART TLLLRMRLFG CIFSPIMIGI
ATQSAPILIG LYGWQWQASI APAPWVCVAA AITGQFVVLG ASLSGLGHAR PLFLLSICEQ
GARVVMLAML SRTDIVLVAI GTVGVSLVYA AAAIRLGARL KLFTVREVLA SLMPSIAICA
VVAAAGIAID MARGGGIPAH PIPAVIEAAA ILAVVWIAAL FVFQRSVITA LWKLVRH
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