| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0133 |
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| Symbol | tgt |
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| ID | 5199828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 127798 |
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| End bp | 129042 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579671 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001260642 |
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| Protein GI | 148553060 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.954831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCC CGTGCCGCAG GGCGCGACGC AGCGCAAGTC CCCGGGCGCG AGCCTTGCCG
GGACCTTGGC AGTGCGGGGC CGCGCCTCTA TGGCCTGCGG CCATGACGGC ACCCCGCTTC
CACTTCTCGA TCGCCGCGAC CGACGGCAAG GCCCGCACCG GCACGATCCG CATGCAGCGC
GGCGACATCC GCACCCCGGC GTTCATGCCG GTCGGCACCG CCGCGACGGT CAAGGCGATG
AAGCCCGCCG ACGTCCGCGC GACCGGCGCC GACATCATCC TCGGCAACAC CTATCACCTG
ATGCTGCGGC CGGGCGCCGA GCGCGTCGCC CGGCTCGGCG GCCTGCACCG CTTCATGCGC
TGGGACCGGC CGATCCTGAC CGACAGCGGC GGCTATCAGG TGATGAGCCT GTCGGCGCTG
ACCCGGCGGA GCGAGGAGGG GGTGTCGTTC AAGAGCCATC TCGACGGCTC GGCGCACATG
CTGAGCCCCG AACGGTCGAT CGAGATCCAG CGGCTGCTCG GCTCCGACAT CGTCATGGCG
TTCGACGAGC TGGTGCCGAC CACGACCACC ATGCAGCAGC AGGCCGAGGC GATGGAGCGA
TCGATGCGCT GGGCGAAGCG TTCGCGCGAC GCGTTCGACG CGGGCGGCGA GCATGCCCAG
CGGGCGGCGC TGTTCGGCAT CCAGCAGGGC GCGCTCGACG AGAGGCTGCG CAAGGCCTCG
GCCGACGCGC TGCTCGCCAT CGGCTTCGAC GGCTATGCGG TCGGCGGCCT GGCGGTGGGC
GAGGGGCAGG AGGCGATGTT CGCCACGCTC GACTTCGCGC CGGGCCAGCT CGATCCCGCG
AAGCCCCGCT ACCTGATGGG CGTCGGCAAG CCCGACGACA TCGTCGGCGC GGTCGAGCGC
GGCATCGACA TGTTCGACTG CGTGCTGCCG ACCCGATCGG GCCGCAACGG CCAGGCCTTC
ACCCGCCGGG GCCCGATCAA CCTGCGCAAC GCGCGGTTCG GCGAGGACGA ACGGCCGCTC
GACGAGAGCT GCGCCTGTCC GGTCTGCGGC CAGTTCAGCC GCGCCTATAT CCACCACCTG
ATCCGCGCCG GCGAGATCCT CGGCGCGATG CTGATGACCG AGCATAATCT CAGCTTCTAC
CAGGCGCTGA TGGCCGACCT GCGCGCCGCG ATCGCGGCCG GCACGCTGTC CGCCTTCGCC
GCCGATTTCC GCGCGGCCTA TCATGGCGGC GGCGCGGGGG ACTGA
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| Protein sequence | MDRPCRRARR SASPRARALP GPWQCGAAPL WPAAMTAPRF HFSIAATDGK ARTGTIRMQR
GDIRTPAFMP VGTAATVKAM KPADVRATGA DIILGNTYHL MLRPGAERVA RLGGLHRFMR
WDRPILTDSG GYQVMSLSAL TRRSEEGVSF KSHLDGSAHM LSPERSIEIQ RLLGSDIVMA
FDELVPTTTT MQQQAEAMER SMRWAKRSRD AFDAGGEHAQ RAALFGIQQG ALDERLRKAS
ADALLAIGFD GYAVGGLAVG EGQEAMFATL DFAPGQLDPA KPRYLMGVGK PDDIVGAVER
GIDMFDCVLP TRSGRNGQAF TRRGPINLRN ARFGEDERPL DESCACPVCG QFSRAYIHHL
IRAGEILGAM LMTEHNLSFY QALMADLRAA IAAGTLSAFA ADFRAAYHGG GAGD
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