| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0128 |
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| Symbol | |
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| ID | 5198405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 124542 |
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| End bp | 125537 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579667 |
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| Product | quinone oxidoreductase putative, PIG3 |
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| Protein accession | YP_001260638 |
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| Protein GI | 148553056 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.180561 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGA TTCCCGAATG GATGACCGCG ATCGACCCCG AGGAGAAGGG CGGTCCCGAG
ATATTGCGGC CGGTGCGCCG TCCGGTCCCC GGGCCGGGCC CCGGCCAGGT GCTGATCCGA
GTCGCCGCGG CGGGGGTCAA CCGCCCCGAC GTCGCCCAGC GCAACGGCGC TTATCCGCCG
CCGCCGGGCG CGCCGTCGAT CCTCGGGCTC GAGGTCGCCG GCGAGGTCGT GGCGCTGGGG
GAGGGGGCAT TGCCCGAGCT GCTCGGCCAG CCGGTCTGCG CGCTCGTCGC GGGCGGCGGC
TATGCCGATT ATGTCGCGGC GGAGGCGGGG CTGTGCCTGT CGGTGCCGAA CACGCTGTCG
ATGGTCGAGG CGGCGGCGAT CCCCGAGACC TTGTTCACCG TGTGGAGCAA CGTCTACGAG
CGCGCCTATG CCGCCGACGG CGACCGGCTG CTCGTCCATG GCGGGACCAG CGGGATCGGC
ACCATGGCGA TCCTGCTCGG CCGCATCTTC CAGGTCGAGA CGATCGTCAC CGCCGGATCG
GACGAGAAAT GCGCCGCCGC GATCAAGCTG GGCGCCGCCC ATGCGATCAA CTATCGCAGC
CAGGACTATG TCGCGGAAGT GGCGCGGATC ACCGGGGGCA AGGGGGTCGA CATCGTCCTC
GACATGGTCG GCGGGGCCTA TGTGCCGCGC AACCTCGATT GCCTGGCGGA GGACGGCCGC
CACGTCTCGA TCGCGGTGCT CGGCGGCGCC AAGGCCGAGA TCCCGATCTG GAAGATCATG
CAGAAGCGGC TGACCCTGAC CGGATCGACG CTGCGGCCGC GCAGCGTCGC TTTCAAGACG
GCGGTTGCCG ACGAGATCGC CTCGGTCGTC TGGCCGCATG TCGAGGAGGG GCGGCTCAAG
CCCGTGATCG ACGCGACCTT CCCGCTCGCC CAGGCGGCCG ACGCGCATCG CCGCCTGGAC
GAGGATCATG TCGGGAAGGT CGTGCTCGTC AACTGA
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| Protein sequence | MAEIPEWMTA IDPEEKGGPE ILRPVRRPVP GPGPGQVLIR VAAAGVNRPD VAQRNGAYPP
PPGAPSILGL EVAGEVVALG EGALPELLGQ PVCALVAGGG YADYVAAEAG LCLSVPNTLS
MVEAAAIPET LFTVWSNVYE RAYAADGDRL LVHGGTSGIG TMAILLGRIF QVETIVTAGS
DEKCAAAIKL GAAHAINYRS QDYVAEVARI TGGKGVDIVL DMVGGAYVPR NLDCLAEDGR
HVSIAVLGGA KAEIPIWKIM QKRLTLTGST LRPRSVAFKT AVADEIASVV WPHVEEGRLK
PVIDATFPLA QAADAHRRLD EDHVGKVVLV N
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