| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0124 |
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| Symbol | |
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| ID | 5198806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 118408 |
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| End bp | 120903 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640579663 |
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| Product | hypothetical protein |
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| Protein accession | YP_001260634 |
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| Protein GI | 148553052 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0544905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGACCG CCTGGGCGCT GGCGCTGCGC GACATGCGCG GCGGGCTGAA GGGGCTTCGC
CTGCTGATCA TCTGCCTGTT CCTCGGCGTC GCCGGGCTGG CCGGTGTCGG CAGCCTGTCG
CGCGCGATCA CCGCCGAGCT CGACAGCCGG GGCCAGGAGA TATTGGGCGG CGACATCGAG
ATGCGCGTCG CCCAGCGCGA GGCCGCGCCC GACGAACGCG CCGCCTTCGC CCGGCAGGGC
CTGGTGTCCG AGACGATCCG GCTGCGCGCC ATGGCCTCGC GCGCCGACGC GGCGGCCGCC
GTGCTGGCCG AGCTCAAGAG CGTCGACGAT CGCTGGCCGC TCTACGGCAC ATTGCGGCTG
GAGCCGGGCG CGCTCGCCCC CCGTCCCGCC GGCCTCGATG CGATGGTCGC CCCCGCGCTG
GCCGAGCGGC TGTCGCTGCG GATCGGCGAC AGCGTGCGGA TCGGCGAAAC CAGCTTCCGG
GTAGCAGGAC TGATCGCCGA GGAGCCCGAC CGGGTCGGCG AGGGCTTCAC CCTGGGACCG
AGCATCCTCG TCTCGCGCGA GGGGCTGGCG GCGACCAGGC TCGTCCAGCC CGGCAGCCTG
TTCACCGCGC GCTACCGCAT CCGCCTGCCC GCCGACCGCG ACGCCCATGC GATCGCCGAA
CGGCTCGGCG AGCGCTTCCA CGACGCCAAT TGGGAGGTCA CCGACCGCAC CAACGCCGCG
CGCGGGCTGC GCCGGCTGGT CGACCAGCTC GGCCAGTTCC TGACGCTGGT CGGGCTGACC
GCGCTGGTCG TCGCCGGGAT CGGCGTCGGC AACGGCGTCG CCTCCTGGCT CGACCAGCGG
CGGCCCGGCA TCGCGACGCT CAAGATACTG GGCGCCTCGT CCGCCACCAT CTTCCGCATC
TACCTGATCC AGGTCGCGAT CGTCTCGGCG GGGGCGATCC TCGCCGGCCT CGCCGTCGGC
GCGGCGGTGC CGGCGATCGT CGGCCGGCTG GCGGGCGACG CGCTGCCGGT CGCGCCGAAA
TTCGCGATCT TCCCGCTGCC GCTGCTGATC AGCGCCGTCT ACGGCCTGCT CGCCGCGCTG
CTGTTCAGCC TGTCGCCGCT GGCGCGGGCG GGGCAGGTCA GCCCGGCGGC GATCTTCCGC
GCGCGGGTCG AGCCGTTCGG CTGGCCGCGC TGGCGGGTGC TGCTGCCGAT GCTCGGCGCG
GGCCTGGGCA TCGCCCTGCT CGCCGTCGCC ACCGCGCGGC AGCCGATGCT GAGCGCCGGC
TTCCTCGCCG CGACCGCCGG CATCTTCGCG CTGCTCGGCG CGATCGGCTG GCTGGTCCGG
CGCGGCGCCC GCGCCCTGCC CCGCCCGCGC CGGCCACTGC TGCGCCTCGC CATCGCCAAT
CTCCACCGCC CGGCGGCGCA GACCGACCGG CTGATCGTCG CGCTCGGCCT CGGCCTCACC
CTGTTCGTGC TGCTCGCGGT GCTGCAGACC AGCCTGACCC ACCAGATCGA GAAGACCGTC
CCCGCCGTCG CGCCCAATTT CTTCGCGCTC GACGTGCCGA CCGAGGATAT CGACCGCTTC
CGCTCGACCG TGCTCGCCCG CGCGCGCGGG GCGAAGATCG ACAGCGTGCC CTCGCTGCGC
GGATCGGTGG TCGCGGTGCG CGGCGTCCGC GTCACCGACA TGAAGCCGGT TCCCAAGGGC
GCGTGGATCC TCAACGGCGA TCGCGGGCTG ACCTATGCGG CCAGGCTCGC CGAGGGCAAC
GAGATCGTCG CCGGCCAATG GTGGCCCGCC GACTATGCCG GACCGCCGCT GATCTCAGTC
GAGGAGCAGG CGGCCAAGGC GCTCGACCTC AAGCCCGGCG ACAGGATGAC CCTGTCGGTG
CTCGGCGTCG AGATCGAGAC GACCGTCGCG TCGATCCGGC GGGTCAACTG GGAGACGATG
GGGTTCAACT TCGGCATCGT CTTCGCGCCG GGCGCGCTCG AAGGCGCCCC GCACAGCTAC
ATGGCGACGA TCGCGATCCC CGACGCGCGC GAGGCGGCGG TCAACCGCGC CGTGATCGCG
GGCTTCCCCT CGGTGTCGCT GATCCGGGTC AAGGACGTGG TCGAGCAGGT CTCGTCGATC
TTCGGCCAGC TCGCCACCGC GATCCGGGCG GCGGCGTCGG TGGCGCTCGC GGCCGGGGTC
GCGGTGCTGG TCGGCGCGGT CGCCGCCTCG CGCCGCGCGC GGCTCTACGA CGCGGTGCTG
CTCAAGCTGC TCGGCGCGAG CCGCCGCCAG GTCCTGGCGG CGCAGGCGAT CGAATATGCC
CTGCTCGCCG CCATCATCGC GCTGCTCGCG CTGGCGGCCG GGACGGCGGC CGGCTGGTAT
GTCGTCACCC GGATCTTCGA GCTGGCCTGG GCGCCCGACT GGCCGATCGT GCTGGCGACG
CTCGCGGCCG GGGCGCTCGG CACGCTCGGC ATCGGCCTGC TCGGATCGCT GCCGGTGCTG
GCGGCGCGCC CGGCAGCGGC GCTGCGGTCC TTATAG
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| Protein sequence | MRTAWALALR DMRGGLKGLR LLIICLFLGV AGLAGVGSLS RAITAELDSR GQEILGGDIE
MRVAQREAAP DERAAFARQG LVSETIRLRA MASRADAAAA VLAELKSVDD RWPLYGTLRL
EPGALAPRPA GLDAMVAPAL AERLSLRIGD SVRIGETSFR VAGLIAEEPD RVGEGFTLGP
SILVSREGLA ATRLVQPGSL FTARYRIRLP ADRDAHAIAE RLGERFHDAN WEVTDRTNAA
RGLRRLVDQL GQFLTLVGLT ALVVAGIGVG NGVASWLDQR RPGIATLKIL GASSATIFRI
YLIQVAIVSA GAILAGLAVG AAVPAIVGRL AGDALPVAPK FAIFPLPLLI SAVYGLLAAL
LFSLSPLARA GQVSPAAIFR ARVEPFGWPR WRVLLPMLGA GLGIALLAVA TARQPMLSAG
FLAATAGIFA LLGAIGWLVR RGARALPRPR RPLLRLAIAN LHRPAAQTDR LIVALGLGLT
LFVLLAVLQT SLTHQIEKTV PAVAPNFFAL DVPTEDIDRF RSTVLARARG AKIDSVPSLR
GSVVAVRGVR VTDMKPVPKG AWILNGDRGL TYAARLAEGN EIVAGQWWPA DYAGPPLISV
EEQAAKALDL KPGDRMTLSV LGVEIETTVA SIRRVNWETM GFNFGIVFAP GALEGAPHSY
MATIAIPDAR EAAVNRAVIA GFPSVSLIRV KDVVEQVSSI FGQLATAIRA AASVALAAGV
AVLVGAVAAS RRARLYDAVL LKLLGASRRQ VLAAQAIEYA LLAAIIALLA LAAGTAAGWY
VVTRIFELAW APDWPIVLAT LAAGALGTLG IGLLGSLPVL AARPAAALRS L
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