Gene Swit_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0115 
Symbol 
ID5198868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp111410 
End bp111808 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content70% 
IMG OID640579654 
Productdihydroneopterin aldolase 
Protein accessionYP_001260625 
Protein GI148553043 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.379308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCCG CCCGGCTCGA CGGCCTCGTC CCCGATCATC TCGGCCCGCG CACCCGGCGG 
ATCGTGCTGC GCGACCTCGC GGTGCCGGTC GACATCGGCT TCCACGATTT CGAGGTCGGC
AATCCCCAGC GCGTGTCCGT GACGGTCGAG GTCTGGCTCG ACGAGGCGAG CTTCGCCGCG
GTCGACGAGG TCGCCGCCGC CTGGGACTAT GATTTCCTGC GCAGCGAGAT CCTGCTGCTG
GTCGAGGGGC GGCGCTACAA CCTGCAGGAG ACCCTCGCGC GCGAGATCTA TACGCTGGTC
GCCGCGCGCG CCGGGGTGAA GGGCCTGCGC GTCGCGACCA GCAAGCCCGA CGTCTATCCC
GACTGCGCCG AGGTCGGGGT GGAGCTCAGC TCCTTCTGA
 
Protein sequence
MDPARLDGLV PDHLGPRTRR IVLRDLAVPV DIGFHDFEVG NPQRVSVTVE VWLDEASFAA 
VDEVAAAWDY DFLRSEILLL VEGRRYNLQE TLAREIYTLV AARAGVKGLR VATSKPDVYP
DCAEVGVELS SF