| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0111 |
|---|
| Symbol | |
|---|
| ID | 5198999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 108644 |
|---|
| End bp | 109219 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640579650 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260621 |
|---|
| Protein GI | 148553039 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0479714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAA CCACGCCGCC TCCCGATTTC GCCGGACTGT CGCTGAGCGA CATCGCCGCC
TTCGCGGCCG ACAACCGCCT GCCGCCCGTC GAGAAATGGA ATCCGGCGCA TTGCGGCGAC
AGCTTCATGC GGATCGCCAG CGACGGCACC TGGTTCCATG AAGGATCGCC GATCGGCCGC
GCCGCGATGG TGCGGCTGTT CTCGACGATC CTGCGGCGCG AGCCCGACGG CGGCTATGTC
CTCGTCACCC CGGTCGAGAA GCTGTCGATC GCCGTCGACG ACGCCCCGTT CGTCGCGGTC
GAGATGAAGG TCGAGGGCGA AGGCCGGAAA CGCCGGATCG CCTTCCGGCT CAACACCGGC
GACCTGGTCG TCGCCGACGC GGCGCATCCG CTGCGGATCG TCGAGCGCGA CGACGGCCCG
CATCCCTATG TCACGGTGCG CAAGGGCCTC GACGCGCTGA TCGCGCGGCC GGTCTATTAT
GAAATGGTCA ACCTCGCGCT CGACGAGGGC GGCGAGGACG GCGACCGGCC GGGGCTGTGG
AGCGAAGGCA GCTTCTTCGC GCTCGACGCG CAATGA
|
|---|
| Protein sequence | MPETTPPPDF AGLSLSDIAA FAADNRLPPV EKWNPAHCGD SFMRIASDGT WFHEGSPIGR
AAMVRLFSTI LRREPDGGYV LVTPVEKLSI AVDDAPFVAV EMKVEGEGRK RRIAFRLNTG
DLVVADAAHP LRIVERDDGP HPYVTVRKGL DALIARPVYY EMVNLALDEG GEDGDRPGLW
SEGSFFALDA Q
|
|---|
| |