| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0107 |
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| Symbol | |
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| ID | 5198995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 102767 |
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| End bp | 105019 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579646 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001260617 |
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| Protein GI | 148553035 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.697068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATA TCGCCGAGCT GCCCGAAGAC AGCGTCCGCA ACACCCCCTT CGACAGCGCC
CTGTCCGATC GCTATCTCGT CTACGCCCTG TCGACGATCA CGGCGCGCTC GCTGCCCGAC
GTGCGCGACG GGCTGAAGCC GGTGCACCGG CGCTTGCTCT GGGCGATGCG GCTGCTGCGG
CTCGATCCGG CGTCGGGCTA CAAGAAATGC GCCCGCGTCG TCGGCGACGT GATCGGCAAA
TATCACCCGC ATGGCGACCA GTCGGTCTAT GACGCGATGG TCCGCCTCGC CCAGACCTTC
TCGCTGCGCT ACCCGCTGGT CGACGGGCAG GGCAATTTCG GCAATGTCGA CGGCGATAAC
GCCGCGGCGA TGCGCTATAC CGAGGCGCGG CTGACCGCGG CGGCGGGCGA GCTGATGGCC
GGCCTCGACG AGGGCACGGT CGATTTCCGC CCCACCTACA ATGGCGAGGA GGAGGAGCCG
GAGATATTCC CCGGCCTGTT CCCGAACCTG CTCGCCAACG GCGCCAGCGG CATCGCCGTC
GGCATGGCGA CCTCGATCCC GCCGCACAAT GTCGCCGAGC TGATCGACGC CGCGGTGCTG
CTGATCGACA AGCCCGAGGC CGAGACCGCC GAGCTGCTCG ACCATGTGAA GGGCCCCGAT
TTCCCGACCG GCGGCGTGCT GGTCGACAGC CCGGCGACGA TCGCCGAGGC CTATGCGACG
GGGCGCGGCG CCTTCCGCGT CCGCGCGAAG ATCGAGAAGG TCGACGAGAA GGGCGGCGGC
TGGCACCTGG TGGTCAGCCA GATCCCCTAT CAGGTCCAGA AGTCGAAGCT GATCGAGCAG
ATCGCCGAGC TGATCAACGA CAAGAAGCTG CCGATCCTCG CCGATGTCCG CGACGAGAGC
GACGAGGAGA TCCGCATCGT CCTCGAACCG CGCAGCCGCA CGGTCGACGC CGACATGCTG
ATGGAGAGCC TGTTCCGGCT GACCGAGCTG GAGGTCCGTG TCTCGCTCAA CCTCAACGTC
CTCGACGACA CGCGCACGCC GCTGGTGATG AGCCTCAAGC AGGCGCTCGC CGCCTGGCTC
AAGCACCAGT TCGAGGTGCT GATCCGCCGC TCGCAGCACC GGCTCGCCAA GATCGCCGAC
CGGATCGAGC TGCTCGACGG CTATCTGATC GTCTATCTCA ACCTCGACCG GGTCATCCAG
ATCATCCGCG AGGAGGACGA GCCTAAGCCG GTGATGATGG CCGAGTTCGG GCTGACCGAC
CGCCAGGCCG AGGCGATCCT CAACATGCGC CTGCGCAGCC TGCGCCGGCT GGAGGAGATG
GAGCTCACCC GGGAGCGCGC GACGCTCGAC GCCGAGGGCA AGGAGCTAGA GGCGCTGATC
GCCAGCCCGG CGCGGCAGCG CACCCGAATG AAGCGCGACC TCGCCGCGCT GCGCGAGCGC
TACGGCCCCG AGACCGCGCT CGGCGCGCGC CGCACCCTGC TGTCCGAGGC CGCGCCGGCG
CGCGAGATCC CGCTGGAGGC GATGGTCGAG CGCGAGCCGG TGACGGTGAT CCTGTCGCAG
CGCGGCTGGA TTCGCGCGAT GAAGGGCCAT CTCGACGAGG CGGCGCAGGC GGCGGTCAAG
TTCAAGGAGG GCGACGGCCC GGCCCACGCG ATCCGCGCCC AGACCACCGA CCGCATCCTG
CTGGCGACCG ACCAGGGCCG CTTCTACACC CTGCCGGCGG ACAAGCTGCC CGGCGGCCGC
GGCTTCGGCG AGCCGGTGCG GCTGTTCGCC GACATCGACG CCGACGCGCG GGTGGCGGCG
CTGCTGGCGG CGAAGCCGGG CGCCGAGCTG CTGCTCGCCT CGGGCGACGG CAAGGGCTTC
GTCGTCGACA TGGCCGACGT CACCGCCGAG ACGCGCAAGG GCAAGCAGGT CGTCAACCTG
CGCGAGGGCG GGCGGCTCAA GGTCGTCCAT CCGGTCGCGC CGACCGACGA CTATGTCGCC
GCGATCGGCG ACAACCGGAA GATGGTGATC TTCCCGCTCG GCGAGCTGCC GCGCATGGCG
CGCGGCCAGG GCGTCACCAT CCAGCGCTAC AAGGACGGCG GCCTGTCCGA CGCGATCAGC
TTCAGGCTCG ACGACGGGTT GAGCTGGACG ATGGGCGGGG ATACCGGGCG GACCCGGACC
GAGGCCGACC TTACCCCGTG GCGCGCGGCG CGCGGCGCGG CGGGACGGAT GCCGCCGGTC
GGCTTCCCCC GCGACAACCG GTTTCGGGGA TAG
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| Protein sequence | MTDIAELPED SVRNTPFDSA LSDRYLVYAL STITARSLPD VRDGLKPVHR RLLWAMRLLR
LDPASGYKKC ARVVGDVIGK YHPHGDQSVY DAMVRLAQTF SLRYPLVDGQ GNFGNVDGDN
AAAMRYTEAR LTAAAGELMA GLDEGTVDFR PTYNGEEEEP EIFPGLFPNL LANGASGIAV
GMATSIPPHN VAELIDAAVL LIDKPEAETA ELLDHVKGPD FPTGGVLVDS PATIAEAYAT
GRGAFRVRAK IEKVDEKGGG WHLVVSQIPY QVQKSKLIEQ IAELINDKKL PILADVRDES
DEEIRIVLEP RSRTVDADML MESLFRLTEL EVRVSLNLNV LDDTRTPLVM SLKQALAAWL
KHQFEVLIRR SQHRLAKIAD RIELLDGYLI VYLNLDRVIQ IIREEDEPKP VMMAEFGLTD
RQAEAILNMR LRSLRRLEEM ELTRERATLD AEGKELEALI ASPARQRTRM KRDLAALRER
YGPETALGAR RTLLSEAAPA REIPLEAMVE REPVTVILSQ RGWIRAMKGH LDEAAQAAVK
FKEGDGPAHA IRAQTTDRIL LATDQGRFYT LPADKLPGGR GFGEPVRLFA DIDADARVAA
LLAAKPGAEL LLASGDGKGF VVDMADVTAE TRKGKQVVNL REGGRLKVVH PVAPTDDYVA
AIGDNRKMVI FPLGELPRMA RGQGVTIQRY KDGGLSDAIS FRLDDGLSWT MGGDTGRTRT
EADLTPWRAA RGAAGRMPPV GFPRDNRFRG
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