Gene Swit_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0101 
Symbol 
ID5198125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp94528 
End bp96474 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content69% 
IMG OID640579640 
ProductK+ potassium transporter 
Protein accessionYP_001260611 
Protein GI148553029 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.185505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACG ACATAGCCGA CCCCGAAGGG CCGCCGCGCA AGGGCCGTCT CCGCGAAGAA 
GGCATGGCGG CGCTGACGCT GGGCGCGCTC GGCGTCGTCT TCGGCGACAT CGGCACCAGC
CCGATCTACG CCTTTCGCGA GGCGCTGGGC CAGGCGGCCG AGGACGGGAT CGTCGCCGGC
GAGATCCTCG GCGTGCTCAG CCTCGCGCTG TGGGCGCTGA TCCTCGTCGT CACCTGCAAA
TATGTGCTGT TCCTGATGCG CGCCGACAAC AACGGCGAGG GCGGCGTGCT GGCGCTGATG
ACGCTCGCGC AGCGCTCGAC CCGCCGCCGC CGGACGCTGG TGATGGCGCT CGGCGCGATC
GGCGCGGCGC TGTTCTACGG CGACGGGGTG ATCACCCCCG CCCTGTCGGT GCTGTCGGCG
GTCGAGGGCC TCAAGACCAT TCCCGGCCTC GAACATTCGG TGTCGCGCGG CGAGATATTG
CTGATCACCT CCGCGATCCT GATCGGCCTG TTCCTGATGC AGGCGCGCGG CACGCGGATC
GTCGGGCGGC TGTTCGGCCC GGTCTGCCTG GTCTGGTTCG TGACGATCGG CGGCATCGGC
CTGATCCACA TCGCCGACCA GCCCGCGATC CTGGCCGCGC TGCTGCCGCA CAACGGCGTG
CTGTTCATGG CCAATCACGG CGTCGCCGGC ATGTTCGTGA TGGGCGCGGT GTTCCTGACC
GTGACCGGCG CCGAGGCGCT GACCGCCGAC ATGGGCCATT TCGGCGCGAA GCCGATCCGC
ACCGGCTGGC TGGCGATCGT CTTCCCGGCG CTGGCGCTCA ACTATCTCGG CCAGGGCGCG
TTCGCGCTCC ACCGGCTGGA GGTCGCGTCG GCGCGGGGAG TCGAGTTCGT CAACCAGGAC
TGGTTCTTCC TGATGGCGCC CGGCCTCGCC CGCATCCCGC TGGTGATCCT GGCGACCTGC
GCAACCGTGA TCGCCAGCCA GGCGGTGATC ACCGGCGCCT ATTCGCTGAC CCGCCAGGCG
ATCCAGCTCG GCCTGCTGCC GCGCCTCAAG ATCCGCCAGA CCTCCGAACA TGCCGCCGGG
CAGATCTACC TGCCGACGAT CACCATGCTG CTGTTCGTCG GGGTGATGGT GCTGGTGCTG
GGCTTCGGCT CCTCCTCGGC GATGGCGGCG GCCTACGGCG TGTCGGTGTC GGGGACGATG
GTGGTGACGA CCTGCCTCGC CTTCCTCGTC GTGCGGCGGA GCTGGGGCTG GGGCTGGCCG
CTGACGGTCG CCGTCATCGT GCCGCTGCTG CTGCTCGACC TGTTCTTCTT CGGCGCCAAC
ATCCTGCGCA TCTACGAGGG CGGCTGGGTG CCGCTGATCG TCGCGGGCGG GGTCGGCCTG
CTGATCGTGA CCTGGGTGCG CGGGCGCAAG CTGCTGCTGG CGATCGACCA GAGCCAGGCG
ATCGAGCTCG AGGAGCTGGC GCGCATGCTC CGCGCCCGGC CGCCCGAGCG GGTGCCCGGC
ATGGCGATCT TCCTGTCGTC GGGGATGGAG GCCGCGCCGA GCGCGCTGCT CCACAACCTC
AAGCACAACA AGATCCTGCA CGAGCGCAAC CTGGCGCTGA CCATCAACAC GGTGAACCAG
CCGGCCGTGC CCGCCGCCCA GCGGCTCGAC ATGACCAACA TCGACGAGAA TTTCACCCGC
GCGGTGCTCA ACTACGGCTT CATGGAAAGC CCCGACATCC CGCGCGACCT GGCCTTCGCG
CTGCGCCATG GCGACAACAA GCTGGAGCCG ATGCAGACCA GCTATTTCAT CGGCCGGTCG
ACGCTGCGCC CGTCGAAGCA CAGCGGCATG CCCTTCTGGC AGGACCTGCT GTTCATCTTC
CTCTACCGCA ACGCGTCCGA CCCGACCGAC TTCTTCCGCA TCCCGCCCAA TCGGGTGGTG
GAGCTGGGAT CGCAGACCAC GATCTAG
 
Protein sequence
MRNDIADPEG PPRKGRLREE GMAALTLGAL GVVFGDIGTS PIYAFREALG QAAEDGIVAG 
EILGVLSLAL WALILVVTCK YVLFLMRADN NGEGGVLALM TLAQRSTRRR RTLVMALGAI
GAALFYGDGV ITPALSVLSA VEGLKTIPGL EHSVSRGEIL LITSAILIGL FLMQARGTRI
VGRLFGPVCL VWFVTIGGIG LIHIADQPAI LAALLPHNGV LFMANHGVAG MFVMGAVFLT
VTGAEALTAD MGHFGAKPIR TGWLAIVFPA LALNYLGQGA FALHRLEVAS ARGVEFVNQD
WFFLMAPGLA RIPLVILATC ATVIASQAVI TGAYSLTRQA IQLGLLPRLK IRQTSEHAAG
QIYLPTITML LFVGVMVLVL GFGSSSAMAA AYGVSVSGTM VVTTCLAFLV VRRSWGWGWP
LTVAVIVPLL LLDLFFFGAN ILRIYEGGWV PLIVAGGVGL LIVTWVRGRK LLLAIDQSQA
IELEELARML RARPPERVPG MAIFLSSGME AAPSALLHNL KHNKILHERN LALTINTVNQ
PAVPAAQRLD MTNIDENFTR AVLNYGFMES PDIPRDLAFA LRHGDNKLEP MQTSYFIGRS
TLRPSKHSGM PFWQDLLFIF LYRNASDPTD FFRIPPNRVV ELGSQTTI