Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0099 |
Symbol | |
ID | 5198123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 93521 |
End bp | 93907 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640579638 |
Product | thioesterase superfamily protein |
Protein accession | YP_001260609 |
Protein GI | 148553027 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.809262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTCG ATTCGCCCTA TGCCGAGGTG ATCGGCGCGC ATCCCAACCG GGCGACCGGC GAGCCGATAT TGAGCGTGAG CTGGCGCCCC GCGATCGAGG GACGGCCGGG CTTCATCCAT GGCGGCGTGA TCGCCGGCCT GCTCGAAATG TCCTGCTACG AGGCGCTCGC CCACGAATTC CGCGAAACCG GCCTGCCCAA GGTGAAGCCG ATCAACATCG CGGTCGACTA TCTGCGCGGC GGGCTGATGA CGGAGACCCA TGCGCTCGCC CAGATCGTCC GGATCGGCAA GCGCGTCGCC AATGCCAGCG CGATGTGCTG GCAGGACGAC CGGTCGAAGC CGATCGCCAC CGCCCGCATG CACATCCTGA TCGATCGCCA GGGGTGA
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Protein sequence | MDFDSPYAEV IGAHPNRATG EPILSVSWRP AIEGRPGFIH GGVIAGLLEM SCYEALAHEF RETGLPKVKP INIAVDYLRG GLMTETHALA QIVRIGKRVA NASAMCWQDD RSKPIATARM HILIDRQG
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