Gene Swit_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0097 
Symbol 
ID5198121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp91652 
End bp91981 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content63% 
IMG OID640579636 
ProductMarR family transcriptional regulator 
Protein accessionYP_001260607 
Protein GI148553025 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.427273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.972576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAA ACCAGCTTTC CCAGTGGATG CGAGCCTTGG TCTCCTACGT CCGCTCCGGG 
CAGCCCGATC TGACGAACCG GCAGATGGCC CTGCTGCTGA TCAGCTACAT CACCCCCGGC
CCCCACACGG TGCGCGGCCT GGCCCAGCAA CTGGGCGTCT CCAAGCCGGT GATAACGCGC
GCCTTGAATA CATTGGGCTC GCTCGGCTAT CTGCGCCGCG AACGCGACGA CAACGACCGT
CGCAACATCT TCGTCGCCAA GACCGAAAAA GGGGCCGCCT TCCTCGATGC CTTCGGAAAA
TCCATCGATC TCGAGAGGGC CCGCGGCTGA
 
Protein sequence
MSENQLSQWM RALVSYVRSG QPDLTNRQMA LLLISYITPG PHTVRGLAQQ LGVSKPVITR 
ALNTLGSLGY LRRERDDNDR RNIFVAKTEK GAAFLDAFGK SIDLERARG