| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0089 |
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| Symbol | |
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| ID | 5200418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 84906 |
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| End bp | 86171 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640579628 |
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| Product | 3-oxoacyl-[acyl-carrier-protein] synthase II |
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| Protein accession | YP_001260599 |
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| Protein GI | 148553017 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCG TGGTCGTAAC CGGATTGGGT CTTGTCACGC CGCTCGGCGC GGACGTCGAG
ACCGCCTGGG CCAACCTCAT CGCCGGCAAG TCGGGCGCGG GGCGGATCAC CCGCTTCGAC
ACGACCGAGC AGGTCTGCAA GATCGCGTGC GAGGTCAAGC CCGCCGACCA TCCTTATGGC
TTCGATCCGA ACAAGCGCGT CGACCATAAG GTGCAGCGGC AGGTCGATCC CTTCATCATC
TACGGCATCG ATGCCGCCGG CCAGGCGCTC GAGGATGCCG GCCTGACCGA GATGAGCGAA
GAGGAAAGCT ACCGCGCCGG CCTGTCGATC GGCTCGGGCA TCGGCGGCCT TCCCGGCATC
GCCAGCGAGT CGATCGTCTG CGAGACGAAG GGGCCGCGCC GCGTGTCGCC GCACTTCGTC
CATGGCCGCC TGATCAACCT GATCTCGGGC CAGGTCTCGA TCAAATATGG CCTGCGCGGG
CCGAACCACG CAGTCGTCAC CGCCTGTTCG ACCGGCGCGC ACGCGATTGG CGACGCCGCG
CGAATGATCG CGATGGACGA TGCCGACGTG ATGCTGGCGG GTGGCGCCGA GGGCGCGATC
TGTCCGCTCG GCATCGCCGG CTTCGCCCAG GCGCGCGCGC TGTCGACCGA TTTCAACGAC
GAGCCCGAAA AGGCCTCGCG TCCCTATGAC AAGCGTCGTG ACGGCTTCGT CATGGGCGAG
GGCGCCGGCA TCGTCGTGCT CGAGGAATAT GAGCATGCCA AGGCGCGCGG CGCGAAGATC
TATGCCGAGG TGATCGGCTA TGGCCTGTCG GGCGACGCCT ATCACGTCAC CGCGCCGCAT
CCCGATGGAT CGGGCGCCTA TCGCTCGATG GCGATGGCGC TCAAGAAGTC GGGCCTGCAA
CCGTCCGACA TCGACTATAT CAACGCCCAT GGCACCTCGA CCCCGCTCGG CGACGAGCTG
GAGGCCGGCG CCGTCCGCCG CCTGTTCGGC GACGCGCTCA AGACCGTGTC GATGAGCTCG
ACCAAGTCGG CGATCGGGCA TCTGCTCGGC GGCGCCGGCG CGGTCGAATC GATCTTCTGC
ATCCTGGCGA TGCGCGATCA GATCGTGCCG CCGACCCTGA ATCTCGAAGA TCCGAGCGAC
GGGCTGGAGG ACTTCGACCT GGTTCCGCTC AAGGCGAAGA AGCGCCCGGT TCGCGCCGTG
CTCAACAACA GCTTCGGCTT CGGCGGCACC AACGCCAGCC TCGTCATGCG CAAGCTCGAG
GATTGA
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| Protein sequence | MRRVVVTGLG LVTPLGADVE TAWANLIAGK SGAGRITRFD TTEQVCKIAC EVKPADHPYG
FDPNKRVDHK VQRQVDPFII YGIDAAGQAL EDAGLTEMSE EESYRAGLSI GSGIGGLPGI
ASESIVCETK GPRRVSPHFV HGRLINLISG QVSIKYGLRG PNHAVVTACS TGAHAIGDAA
RMIAMDDADV MLAGGAEGAI CPLGIAGFAQ ARALSTDFND EPEKASRPYD KRRDGFVMGE
GAGIVVLEEY EHAKARGAKI YAEVIGYGLS GDAYHVTAPH PDGSGAYRSM AMALKKSGLQ
PSDIDYINAH GTSTPLGDEL EAGAVRRLFG DALKTVSMSS TKSAIGHLLG GAGAVESIFC
ILAMRDQIVP PTLNLEDPSD GLEDFDLVPL KAKKRPVRAV LNNSFGFGGT NASLVMRKLE
D
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