| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0087 |
|---|
| Symbol | |
|---|
| ID | 5200416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 83687 |
|---|
| End bp | 84427 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640579626 |
|---|
| Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
|---|
| Protein accession | YP_001260597 |
|---|
| Protein GI | 148553015 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATC TTTCAGGGAT GACCGCGCTG GTGACGGGCG CTTCGGGCGG CATCGGCTCG
GCGATCGCCG GGGCGCTGGT GCGGCAGGGC GCGAAGGTCG CGCTGTCGGG CACCCGCGAG
GACGCGCTGA AGGCGGTGGC GGCGGAGATC GGCGGCGAGA CCGTGATCCT GCCGTGCAAC
CTCGGCGACG CGGAAGCGGT CGACGGCCTG ATCCCGCGCG CGGTCGAGGC GCTGGGCGGC
AAGCTCGACA TCCTCGTCAA CAATGCCGGC GTCACCCGCG ACAACCTGAT CATGCGGATG
AAGGACGAGG AGTGGGACCA GGTGATCTCG GTCAACCTGG AAGCCGCCTT CCGCCTGATC
CGCGCCGCCG CCAAGCCGAT GATGAAGGCG CGCTTCGGCC GCGTCATCAC CATCACCTCG
ATCGTCGGCA CCACCGGCAA TCCGGGGCAG GCCAACTATG CCGCGTCGAA GGCCGGCCTG
GTCGGCATGT CGAAGGCGCT GGCGCAGGAA CTGGCCAGCC GCAACATCAC CGTCAACTGC
GTCGCCCCCG GCTTCATCGC ATCGGCGATG ACCGACGTGC TGGCGGACGC GCAGAAGGAG
GCCCTGCTGG GCAAGATTCC CGCCGGCAAG CTGGGCGAGG GCGGCGACAT CGCCGCCGCC
GTCGTCTATC TGGCCAGCCA GGAGGCATCC TATGTCACCG GCCAGACGCT GCATGTGAAC
GGCGGGATGG CCATGATCTG A
|
|---|
| Protein sequence | MFDLSGMTAL VTGASGGIGS AIAGALVRQG AKVALSGTRE DALKAVAAEI GGETVILPCN
LGDAEAVDGL IPRAVEALGG KLDILVNNAG VTRDNLIMRM KDEEWDQVIS VNLEAAFRLI
RAAAKPMMKA RFGRVITITS IVGTTGNPGQ ANYAASKAGL VGMSKALAQE LASRNITVNC
VAPGFIASAM TDVLADAQKE ALLGKIPAGK LGEGGDIAAA VVYLASQEAS YVTGQTLHVN
GGMAMI
|
|---|
| |