| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0057 |
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| Symbol | |
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| ID | 5200670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 55679 |
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| End bp | 56374 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579596 |
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| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
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| Protein accession | YP_001260568 |
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| Protein GI | 148552986 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0334436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGAG AGTCCTTCGC GCGCCGCGCG CTTCGCTGGA TCGTCCGCGC GCTGATCATC
TTCGTGATCG GCTCGGTGAT CTGGGTCGGC ATCTATCGCT TCGTGCCGCC GCCCGTCACC
ACGACGATGA TCGTCAACGC CTTCGACGGA CGCGGCATCG CCAAGGACTG GATGTCGATC
GACACGATGT CGCCCAACAT GCCGCTCGCC GCGATCGCCG CCGAGGACGG CAATTTCTGC
TCGCACCACG GCTTCGACTT CAAGGCGATC CAGAAGGCGA TGGAGAGCAA TTTCCAGGGC
GACCGGCGGA TCAGGGGCGG GTCGACGATC AGCCAGCAGA CCGCGAAGAA CGCGTTCCTG
TGGCAGAATG GCGGCTATGT CCGCAAGGCG TTCGAAGCCT GGTTCACCGT GCTGATCGAA
CTGCTCTGGC CGAAGAAGCG GATCATGGAG GTCTATCTCA ACATCGCCGA GACCGGGATC
GGCACCTATG GCGCCAATGC CGGGGCGATG CGCTATTTCC ACCATGACGC GTCGCGCCTC
AGCCGCGCCG AGGCGGCGCG CATCGCCGCC GTCCTGCCGC TGCCGAAGAA GCGCGAGGCG
ATCTCCCCGA CCGGCTTCAC CCGCCGCTAC GGCGACCGGA TCGCCCGGCG GATGGGCCAG
GTGCAGCGTT ACGGGCAGGA TGGCTGTTTG AAGTGA
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| Protein sequence | MARESFARRA LRWIVRALII FVIGSVIWVG IYRFVPPPVT TTMIVNAFDG RGIAKDWMSI
DTMSPNMPLA AIAAEDGNFC SHHGFDFKAI QKAMESNFQG DRRIRGGSTI SQQTAKNAFL
WQNGGYVRKA FEAWFTVLIE LLWPKKRIME VYLNIAETGI GTYGANAGAM RYFHHDASRL
SRAEAARIAA VLPLPKKREA ISPTGFTRRY GDRIARRMGQ VQRYGQDGCL K
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