| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0056 |
|---|
| Symbol | |
|---|
| ID | 5200669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 55166 |
|---|
| End bp | 55504 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640579595 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260567 |
|---|
| Protein GI | 148552985 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0718] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00103] DNA-binding protein, YbaB/EbfC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0233417 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCC TCGAGGAAAT GATCGCCGCC GCGCAGAGCG CCGCGCAGAC GATCCAGACG
CAGATGGAAC AGGCCCAGAC CGTGCTCGAC ACGATCGAGG TCGAAGGCGC GGCCGGCGGC
GGCCTCGTCA AGATCCGCGC CACCGCCAAG GGCCGCATCC TCGGCGTGGC GATCGACGAT
TCGCTGATGG AATTGTCCGA GAAGCAGATG CTCGAGGACC TGATCACCGC CGCGATCAAC
GATTGCCGGA CCAAGGCCGA CGCCGCCTCC AACGCCGAGA TGGCGAAGCT GACCCAGGGG
CTGCCGATCC CGCCCGGCTT CAAGATGCCG TTCAGCTGA
|
|---|
| Protein sequence | MKSLEEMIAA AQSAAQTIQT QMEQAQTVLD TIEVEGAAGG GLVKIRATAK GRILGVAIDD
SLMELSEKQM LEDLITAAIN DCRTKADAAS NAEMAKLTQG LPIPPGFKMP FS
|
|---|
| |