| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0055 |
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| Symbol | |
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| ID | 5200390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 53421 |
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| End bp | 55169 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640579594 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_001260566 |
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| Protein GI | 148552984 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0628794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAT CCTCGACACC CTATCGCGTC CTCGCGCGCA AATATCGGCC GCAGAATTTC
AACGAGCTGA TCGGCCAGGA CGCGATGGTG ACGACCCTCG CCAACGCGAT CCGGCGCGGC
CGGCTGGCGC ATGCCTTCCT GCTGACCGGC GTGCGCGGCG TCGGCAAGAC CTCGACCGCG
CGGCTGATCG CCAAGGCGCT CAACTGCATC GGGCCGGACG GGCAGGGCGG GCCGACGATC
GATCCTTGCG GCGTCTGCGA GCCCTGCGTC GCGATCGCCG AGGGGCGGCA TATCGACGTG
GTCGAGATGG ACGCCGCCAG CCACACCAGC ATCGACGACG TCCGCGAGAT CATCGAGGCG
GTGCGCTATG CGTCGGTGTC GGCGCGCTAC AAGATCTACA TCATCGACGA AGTCCACATG
CTGTCGAAGT CGGCCTTCAA CGGCCTGCTC AAGACGCTGG AGGAGCCGCC GGCGCATGTG
AAATTCCTGT TCGCCACGAC CGAGGTGAAC AAGGTCCCGA TCACCGTCCT GTCGCGCTGC
CAGCGCTTCG ACCTGCGGCG CATCACCGCC GACAAGCTGG CCGCGCACTT CACCAACGTC
GTCGCGGCCG AGGGCGTCGA GGCCGATCCC GAGGCGCTGG CGCTGATCGC GCGGGCGGCC
GAAGGCTCGG CGCGCGACGG CCTGTCGATC CTCGACCAGG CGATCGCGCA CGGATCGGGC
CGGGTCGAGG CGCAGCAGGT TCGCGACATG CTGGGCCTGT CCGATCGTGG CGCGGTCCGC
CGCCTGTTCG GCGAGATGCT GAAGGGCGAC GCGGCGGCGG TGCTGGCGAG CATCCGGGGG
CAATATGACC TCGGCGTCGA GCCGGTGGCG ATGCTGCACG GGCTGCTTGA GACCTGCCAT
GCGATCACCC GCGCCAAGGT GGCCGGGACC GACGATCCCG CGCTGTCGGC CGAGGAGCGC
GAGGCCTATG GCGACTGGGC CGGCAAGCTC GGCTTCGCGA CGCTCCACCG GCTGTGGCAG
CTCCTGCTCA AGGGCCATGG CGAGGTCCAG ACCGCCGCCA TGCCGATCGA GGCGGCCGAG
ATGGCGCTGC TCCGCGTCGT CCATGCCAGC CAGCTTCCCG ATCCGGGCGA GCTGGCGCGC
CGGCTCGCCT CGGGCGACCT GAACCTGCCC GTCCAGCCCG CGCCCGCCCA GCCGCCGGCG
GCCGAGCCGC AGGGGGCGCT GATGGCCGCG CCGGCGCCCA TTGCCGCTCC TGCGCCTGCG
CCCGCCCCGA TCGAGACGCC GCCGCCGCTG GCCGCCGTGC CGGCCCCGGC CCCGGTCGTC
GCTCCGGTTC CGGTCGCGAT CCCCGAGCCC GAGCCGGAAC CCGCGCCGCC GTCGCTGCCC
GCGACCGGCG AGGCGATCCA TGCGCTGCTG CTGCCGGAAA ACGCGCTGCT CGCGCAGCTC
TTCCACGATT ATGCGGCGAT CGTCCGGCTG GAAGGCGAGG AGCTGTTGAT CGCGCGCCAC
CAGCGGCTGC CGCAGAATTT CGCCGGCGAC GTCGCCAATA TCCTCAAGCG ATCCACCGGC
CGGACCTGGT CGGTCGCTAT GGTCGACGAG GCGGGCGCGC CCTCGCTGCT CGCCCGGATC
CGCGCCGAAG AGGACGCGGC GCGCGACGCC ATTCTCGAAT CCCCGCTGGT CAAGGCCGCT
CTGGAAGCCT TTCCGGATGC CGAGCTGATC GACTACAGCG CCCCTGAAAA ACGGAGTCTC
GCATCATGA
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| Protein sequence | MSESSTPYRV LARKYRPQNF NELIGQDAMV TTLANAIRRG RLAHAFLLTG VRGVGKTSTA
RLIAKALNCI GPDGQGGPTI DPCGVCEPCV AIAEGRHIDV VEMDAASHTS IDDVREIIEA
VRYASVSARY KIYIIDEVHM LSKSAFNGLL KTLEEPPAHV KFLFATTEVN KVPITVLSRC
QRFDLRRITA DKLAAHFTNV VAAEGVEADP EALALIARAA EGSARDGLSI LDQAIAHGSG
RVEAQQVRDM LGLSDRGAVR RLFGEMLKGD AAAVLASIRG QYDLGVEPVA MLHGLLETCH
AITRAKVAGT DDPALSAEER EAYGDWAGKL GFATLHRLWQ LLLKGHGEVQ TAAMPIEAAE
MALLRVVHAS QLPDPGELAR RLASGDLNLP VQPAPAQPPA AEPQGALMAA PAPIAAPAPA
PAPIETPPPL AAVPAPAPVV APVPVAIPEP EPEPAPPSLP ATGEAIHALL LPENALLAQL
FHDYAAIVRL EGEELLIARH QRLPQNFAGD VANILKRSTG RTWSVAMVDE AGAPSLLARI
RAEEDAARDA ILESPLVKAA LEAFPDAELI DYSAPEKRSL AS
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