| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0047 |
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| Symbol | |
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| ID | 5200506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 47725 |
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| End bp | 47925 |
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| Gene Length | 201 bp |
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| Protein Length | 66 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640579585 |
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| Product | YcfA family protein |
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| Protein accession | YP_001260558 |
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| Protein GI | 148552976 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1724] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000000425869 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGTAAAT ATTTACACAT GGAGCGGGAC AGCAGGAAGA TCATCAAGCG GCTCCTCTCG
GAAGGCTGGG AGCAGGTGTC GGCGCGAGGG TCGCATCACA AGTTCCGCCG GGACGAGGTA
TCGCTGATCG TTCCCCACCC GAAGCGGGAC CTGCCGATCG GCACGGCCCG CAGCATCGCA
AGGGCAGCGG GATGGCTCTA G
|
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| Protein sequence | MCKYLHMERD SRKIIKRLLS EGWEQVSARG SHHKFRRDEV SLIVPHPKRD LPIGTARSIA
RAAGWL
|
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| |